Evidence map›Paper›PMID 28030630›Full record

ArticlePloS one2016

System-Wide Adaptations of Desulfovibrio alaskensis G20 to Phosphate-Limited Conditions.

Tanja Bosak, Florence Schubotz, Ana de Santiago-Torio, Jennifer V Kuehl, Hans K Carlson, Nicki Watson, Mirna Daye, Roger E Summons, Adam P Arkin, Adam M Deutschbauer

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. pH-dependent genotypic and phenotypic variability inApplied and environmental microbiology · 2025
    Article
  3. Nitrogen and sulfur for phosphorus: Lipidome adaptation of anaerobic sulfate-reducing bacteria in phosphorus-deprived conditions.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Ornithine Lipids inFrontiers in molecular biosciences · 2020
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Tanja BosakDepartment of Earth and Planetary Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.ORCID http://orcid.org/0000-0001-5179-5323
Florence SchubotzUniversity of Bremen and MARUM, Bremen, Germany.
Ana de Santiago-TorioDepartment of Earth and Planetary Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Jennifer V KuehlEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Hans K CarlsonEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Nicki WatsonW.M. Keck Microscopy Facility, The Whitehead Institute, Cambridge, Massachusetts, United States of America.
Mirna DayeDepartment of Earth and Planetary Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Roger E SummonsDepartment of Earth and Planetary Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Adam P ArkinEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Adam M DeutschbauerEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Lawrence Berkeley National Laboratory · USPlanetary Science Institute · USUniversity of Bremen · DEWhitehead Institute for Biomedical Research · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The prevalence of lipids devoid of phosphorus suggests that the availability of phosphorus limits microbial growth and activity in many anoxic, stratified environments. To better understand the response of anaerobic bacteria to phosphate limitation and starvation, this study combines microscopic and lipid analyses with the measurements of fitness of pooled barcoded transposon mutants of the model sulfate reducing bacterium Desulfovibrio alaskensis G20. Phosphate-limited G20 has lower growth rates and replaces more than 90% of its membrane phospholipids by a mixture of monoglycosyl diacylglycerol (MGDG), glycuronic acid diacylglycerol (GADG) and ornithine lipids, lacks polyphosphate granules, and synthesizes other cellular inclusions. Analyses of pooled and individual mutants reveal the importance of the high-affinity phosphate transport system (the Pst system), PhoR, and glycolipid and ornithine lipid synthases during phosphate limitation. The phosphate-dependent synthesis of MGDG in G20 and the widespread occurrence of the MGDG/GADG synthase among sulfate reducing ∂-Proteobacteria implicate these microbes in the production of abundant MGDG in anaerobic environments where the concentrations of phosphate are lower than 10 μM. Numerous predicted changes in the composition of the cell envelope and systems involved in transport, maintenance of cytoplasmic redox potential, central metabolism and regulatory pathways also suggest an impact of phosphate limitation on the susceptibility of sulfate reducing bacteria to other anthropogenic or environmental stresses.

Indexed as

AcclimatizationAdaptation, PhysiologicalAnaerobiosisDesulfovibrioDose-Response Relationship, DrugMutationPhosphatesPhosphorusPhosphatesPhosphorus

Identifiers

PMID28030630
PMCPMC5193443
OpenAlexW2566986652

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.