Evidence map›Paper›PMID 28029088›Full record

ArticleEpidemiology and infection2017

Two levels of specialization in bacteraemic Escherichia coli strains revealed by their comparison with commensal strains.

O Clermont, C Couffignal, J Blanco, F Mentré, B Picard, E Denamur, COLIVILLE and COLIBAFI groups

Abstract read
In one paragraph

Article in Epidemiology and infection, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Serine protease autotransporters of Enterobacteriaceae (SPATEs) are largely distributed among Escherichia coli isolated from the bloodstream.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  10. Article
  11. Diversity of Hybrid- and Hetero-PathogenicFrontiers in cellular and infection microbiology · 2020
    Review
  12. Article
  13. Population-level surveillance of antibiotic resistance inEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

O ClermontINSERM,IAME,UMR1137,Paris,France.
C CouffignalINSERM,IAME,UMR1137,Paris,France.
J BlancoLaboratorio de Referencia de E. coli (LREC),Departamento de Microbioloxía e Parasitoloxía,Facultade de Veterinaria,Universidade de Santiago de Compostela (USC),Lugo,Spain.
F MentréINSERM,IAME,UMR1137,Paris,France.
B PicardINSERM,IAME,UMR1137,Paris,France.
E DenamurINSERM,IAME,UMR1137,Paris,France.
COLIVILLE and COLIBAFI groups

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteraemia caused by Escherichia coli are particularly frequent and severe, contrasting with the commensal character of the strains found in the digestive tract. A better understanding of the relationships between strains of both origins is needed to unravel the pathogenesis of this disease. Two hundred and forty-three commensal strains were compared to 243 bacteraemic strains isolated from adult hosts matched in terms of gender and age, and from similar location and epoch. Phylogenetic grouping, O-type determination, virulence factor content and antibiotic resistance were compared. Compared to commensal strains, the bacteraemic strains were characterized by a higher proportion of B2, C and D phylogroups, and a lower proportion of A, E and F phylogroups. They also had a lower proportion of the B2 subgroup IV (STc141), a higher proportion of virulence factors, and a higher frequency of antibiotic resistance. These differences were more marked for the bacteraemic strains of urinary tract origin with the presence of specific clones, whereas the bacteraemic strains of digestive origin remained non-significantly different from the commensal strains, except for their antibiotic resistance. Thus, two levels of specialization from commensal strains were demonstrated in the bacteraemic strains: resistance to antibiotics in all cases, and virulence for those of urinary tract origin.

Indexed as

SymbiosisAdultAgedBacteremiaDrug Resistance, BacterialEscherichia coliEscherichia coli InfectionsFecesFemaleGenotypeHumansMaleMiddle AgedO AntigensPhenotypePhylogenyO AntigensVirulence FactorsAntibiotic resistancebacteraemiacommensalEscherichia coliphylogenetic groupportal of entryvirulence factor

Identifiers

PMID28029088
PMCPMC9507814

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.