Evidence map›Paper›PMID 28028852›Full record

ArticleProtein science : a publication of the Protein Society2017

Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.

Garrett T Dow, Michel Gilbert, James B Thoden, Hazel M Holden

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Characterization of an aminotransferase from Acanthamoeba polyphaga Mimivirus.Protein science : a publication of the Protein Society · 2021
    Article
  4. Investigation of a sugar N-formyltransferase from the plant pathogen Pantoea ananatis.Protein science : a publication of the Protein Society · 2019
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Garrett T DowDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, 53706.
Michel GilbertNational Research Council Canada, Human Health Therapeutics, Ottawa, Ontario, K1A 0R6, Canada.
James B ThodenDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, 53706.
Hazel M HoldenDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, 53706.
University of Wisconsin–Madison · USNational Research Council Canada · CA

Funding

X-ray Studies of Sugar-Modifying EnzymesR01GM115921 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HOLDEN, HAZEL M. · 2016 to 2019
$1.4M
NIGMS NIH HHS R01 GM115921
6 · The paper itself

Abstract

Campylobacter jejuni is a Gram-negative bacterium that represents a leading cause of human gastroenteritis worldwide. Of particular concern is the link between C. jejuni infections and the subsequent development of Guillain-Barré syndrome, an acquired autoimmune disorder leading to paralysis. All Gram-negative bacteria contain complex glycoconjugates anchored to their outer membranes, but in most strains of C. jejuni, this lipoglycan lacks the O-antigen repeating units. Recent mass spectrometry analyses indicate that the C. jejuni 81116 (Penner serotype HS:6) lipoglycan contains two dideoxyhexosamine residues, and enzymological assay data show that this bacterial strain can synthesize both dTDP-3-acetamido-3,6-dideoxy-d-glucose and dTDP-3-acetamido-3,6-dideoxy-d-galactose. The focus of this investigation is on WlaRG from C. jejuni, which plays a key role in the production of these unusual sugars by functioning as a pyridoxal 5'-phosphate dependent aminotransferase. Here, we describe the first three-dimensional structures of the enzyme in various complexes determined to resolutions of 1.7 Å or higher. Of particular significance are the external aldimine structures of WlaRG solved in the presence of either dTDP-3-amino-3,6-dideoxy-d-galactose or dTDP-3-amino-3,6-dideoxy-d-glucose. These models highlight the manner in which WlaRG can accommodate sugars with differing stereochemistries about their C-4' carbon positions. In addition, we present a corrected structure of WbpE, a related sugar aminotransferase from Pseudomonas aeruginosa, solved to 1.3 Å resolution.

Indexed as

Bacterial ProteinsCampylobacter jejuniProtein DomainsTransaminasesBacterial ProteinsTransaminasesaminotransferaseCampylobacter jejunidTDP-3-amino-3,6-dideoxy-d-galactosedTDP-3-amino-3,6-dideoxy-d-glucoselipooligosaccharidepyridoxal 5′-phosphateWbpEWlaRG

Identifiers

PMID28028852
PMCPMC5326561
OpenAlexW2562058818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.