Evidence map›Paper›PMID 28028841›Full record

ArticleProtein science : a publication of the Protein Society2017

Functional similarities between the dictyostelium protein AprA and the human protein dipeptidyl-peptidase IV.

Sarah E Herlihy, Yu Tang, Jonathan E Phillips, Richard H Gomer

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Sex-Based Differences in Human Neutrophil Chemorepulsion.Journal of immunology (Baltimore, Md. : 1950) · 2022
    Article
  2. Article
  3. Mfsd8 Modulates Growth and the Early Stages of Multicellular Development inFrontiers in cell and developmental biology · 2022
    Article
  4. Identification of novel proteins in themicroPublication biology · 2022
    Article
  5. Altered protein secretion in Batten disease.Disease models & mechanisms · 2021
    Review
  6. Annotating PutativemicroPublication biology · 2021
    Article
  7. UsingFrontiers in cell and developmental biology · 2021
    Review
  8. Article
  9. Extracellular signaling in Dictyostelium.The International journal of developmental biology · 2019
    Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sarah E HerlihyDepartment of Biology, Texas A&M University, College Station, Texas.
Yu TangDepartment of Biology, Texas A&M University, College Station, Texas.ORCID 0000-0002-1100-1338
Jonathan E PhillipsDepartment of Biology, Texas A&M University, College Station, Texas.
Richard H GomerDepartment of Biology, Texas A&M University, College Station, Texas.
Texas A&M University · US

Funding

Elucidation of a eukaryotic chemorepulsion mechanismR01GM118355 · NIGMS · TEXAS A&M UNIVERSITY · PI GOMER, RICHARD H · 2016 to 2019
$1.2M
Elucidation of a Dictyostelium chaloneR01GM102280 · NIGMS · TEXAS A&M UNIVERSITY · PI GOMER, RICHARD H · 2012 to 2015
$1.1M
NIGMS NIH HHS R01 GM102280NIGMS NIH HHS R01 GM118355
6 · The paper itself

Abstract

Autocrine proliferation repressor protein A (AprA) is a protein secreted by Dictyostelium discoideum cells. Although there is very little sequence similarity between AprA and any human protein, AprA has a predicted structural similarity to the human protein dipeptidyl peptidase IV (DPPIV). AprA is a chemorepellent for Dictyostelium cells, and DPPIV is a chemorepellent for neutrophils. This led us to investigate if AprA and DPPIV have additional functional similarities. We find that like AprA, DPPIV is a chemorepellent for, and inhibits the proliferation of, D. discoideum cells, and that AprA binds some DPPIV binding partners such as fibronectin. Conversely, rAprA has DPPIV-like protease activity. These results indicate a functional similarity between two eukaryotic chemorepellent proteins with very little sequence similarity, and emphasize the usefulness of using a predicted protein structure to search a protein structure database, in addition to searching for proteins with similar sequences.

Indexed as

DictyosteliumDipeptidyl Peptidase 4FibronectinsHumansProtein BindingProtozoan ProteinsStructural Homology, ProteinDipeptidyl Peptidase 4DPP4 protein, humanFibronectinsProtozoan ProteinsAprAchemorepellentDPPIVfunctional similarityproteasestructure similarity

Identifiers

PMID28028841
PMCPMC5326566
OpenAlexW2566515005

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.