Evidence map›Paper›PMID 28028020›Full record

ArticleAnnals of botany2017

Museomics resolve the systematics of an endangered grass lineage endemic to north-western Madagascar.

Christian Silva, Guillaume Besnard, Anthony Piot, Jacqueline Razanatsoa, Reyjane P Oliveira, Maria S Vorontsova

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
16.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 35 citations in OpenAlex.

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  6. Museomics Clarifies the Classification ofFrontiers in plant science · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 4 countries.

Christian SilvaUniversidade Estadual de Feira de Santana, Departamento de Ciências Biológicas, Programa de Pós-graduação em Botânica, Av. Transnordestina s.n., Feira de Santana, Bahia 44036-900, Brazil christian_da_silva@hotmail.com.
Guillaume BesnardCNRS, Université de Toulouse, ENFA, UMR5174 EDB (Laboratoire Évolution & Diversité Biologique), 118 route de Narbonne, 31062 Toulouse, France.
Anthony PiotCNRS, Université de Toulouse, ENFA, UMR5174 EDB (Laboratoire Évolution & Diversité Biologique), 118 route de Narbonne, 31062 Toulouse, France.
Jacqueline RazanatsoaHerbier, Département Flore, Parc Botanique et Zoologique de Tsimbazaza, BP 4096, Antananarivo 101, Madagascar.
Reyjane P OliveiraUniversidade Estadual de Feira de Santana, Departamento de Ciências Biológicas, Programa de Pós-graduação em Botânica, Av. Transnordestina s.n., Feira de Santana, Bahia 44036-900, Brazil.
Maria S VorontsovaRoyal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK.
Universidade Estadual de Feira de Santana · BRCentre National de la Recherche Scientifique · FRLaboratoire Evolution et Diversite Biologique · FRRoyal Botanic Gardens, Kew · GBTsimbazaza Zoo · MG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsRecent developments in DNA sequencing, so-called next-generation sequencing (NGS) methods, can help the study of rare lineages that are known from museum specimens. Here, the taxonomy and evolution of the Malagasy grass lineage Chasechloa was investigated with the aid of NGS.

methodsFull chloroplast genome data and some nuclear sequences were produced by NGS from old herbarium specimens, while some selected markers were generated from recently collected Malagasy grasses. In addition, a scanning electron microscopy analysis of the upper floret and cross-sections of the rachilla appendages followed by staining with Sudan IV were performed on Chasechloa to examine the morphology of the upper floret and the presence of oils in the appendages. KEY

resultsChasechloa was recovered within tribe Paniceae, sub-tribe Boivinellinae, contrary to its previous placement as a member of the New World genus Echinolaena (tribe Paspaleae). Chasechloa originated in Madagascar between the Upper Miocene and the Pliocene. It comprises two species, one of them collected only once in 1851. The genus is restricted to north-western seasonally dry deciduous forests. The appendages at the base of the upper floret of Chasechloa have been confirmed as elaiosomes, an evolutionary adaptation for myrmecochory.

conclusionsChasechloa is reinstated at the generic level and a taxonomic treatment is presented, including conservation assessments of its species. Our study also highlights the power of NGS technology to analyse relictual or probably extinct groups.

Indexed as

Endangered SpeciesDNA, PlantFlowersHigh-Throughput Nucleotide SequencingMadagascarMicroscopy, Electron, ScanningPhylogenyPoaceaeDNA, PlantChasechloaconvergent evolutionEchinolaenaextinct speciesForest Shade Cladegenome skimmingherbariummicroendemicmyrmecochorynext-generation sequencingplastomePoaceae

Identifiers

PMID28028020
PMCPMC5314640
OpenAlexW2563411053

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.