Evidence map›Paper›PMID 28027291›Full record

ArticlePLoS genetics2016

Interaction of Prions Causes Heritable Traits in Saccharomyces cerevisiae.

Anton A Nizhnikov, Tatyana A Ryzhova, Kirill V Volkov, Sergey P Zadorsky, Julia V Sopova, Sergey G Inge-Vechtomov, Alexey P Galkin

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 56 citations in OpenAlex.

  1. Amyloid Fibrils of the s36 Protein Modulate the Morphogenesis ofInternational journal of molecular sciences · 2024
    Article
  2. Review
  3. How Big Is the Yeast Prion Universe?International journal of molecular sciences · 2023
    Review
  4. Article
  5. Article
  6. Structural Bases of Prion Variation in Yeast.International journal of molecular sciences · 2022
    Review
  7. Differential Interactions of Molecular Chaperones and Yeast Prions.Journal of fungi (Basel, Switzerland) · 2022
    Review
  8. RopB protein ofFrontiers in plant science · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Neural regeneration research · 2021
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anton A NizhnikovSt. Petersburg State University, Department of Genetics and Biotechnology, 199034 St. Petersburg, Russian Federation.ORCID http://orcid.org/0000-0002-8338-3494
Tatyana A RyzhovaSt. Petersburg State University, Department of Genetics and Biotechnology, 199034 St. Petersburg, Russian Federation.
Kirill V VolkovSt. Petersburg State University, Research Park, Research Resource Center "Molecular and Cell Technologies", St. Petersburg, Russian Federation.ORCID http://orcid.org/0000-0002-8027-5930
Sergey P ZadorskySt. Petersburg State University, Department of Genetics and Biotechnology, 199034 St. Petersburg, Russian Federation.ORCID http://orcid.org/0000-0001-8859-164X
Julia V SopovaSt. Petersburg State University, Department of Genetics and Biotechnology, 199034 St. Petersburg, Russian Federation.ORCID http://orcid.org/0000-0002-7825-273X
Sergey G Inge-VechtomovSt. Petersburg State University, Department of Genetics and Biotechnology, 199034 St. Petersburg, Russian Federation.
Alexey P GalkinSt. Petersburg State University, Department of Genetics and Biotechnology, 199034 St. Petersburg, Russian Federation.
St Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The concept of "protein-based inheritance" defines prions as epigenetic determinants that cause several heritable traits in eukaryotic microorganisms, such as Saccharomyces cerevisiae and Podospora anserina. Previously, we discovered a non-chromosomal factor, [NSI+], which possesses the main features of yeast prions, including cytoplasmic infectivity, reversible curability, dominance, and non-Mendelian inheritance in meiosis. This factor causes omnipotent suppression of nonsense mutations in strains of S. cerevisiae bearing a deleted or modified Sup35 N-terminal domain. In this work, we identified protein determinants of [NSI+] using an original method of proteomic screening for prions. The suppression of nonsense mutations in [NSI+] strains is determined by the interaction between [SWI+] and [PIN+] prions. Using genetic and biochemical methods, we showed that [SWI+] is the key determinant of this nonsense suppression, whereas [PIN+] does not cause nonsense suppression by itself but strongly enhances the effect of [SWI+]. We demonstrated that interaction of [SWI+] and [PIN+] causes inactivation of SUP45 gene that leads to nonsense suppression. Our data show that prion interactions may cause heritable traits in Saccharomyces cerevisiae.

Indexed as

Chromosomal Proteins, Non-HistoneCodon, NonsenseDNA-Binding ProteinsGalactoseMeiosisMicroscopy, FluorescencePeptide Termination FactorsPlasmidsPrionsProteomicsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence DeletionTranscription FactorsChromosomal Proteins, Non-HistoneCodon, NonsenseDNA-Binding ProteinsGalactoseNsi1 protein, S cerevisiaePeptide Termination FactorsPrionsSaccharomyces cerevisiae ProteinsSUP35 protein, S cerevisiaeSUP45 protein, S cerevisiaeSWI1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID28027291
PMCPMC5189945
OpenAlexW2567120179

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.