Evidence map›Paper›PMID 28013522›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2017

Methods for In Vivo/Ex Vivo Analysis of Antimicrobial Peptides in Bacterial Keratitis: siRNA Knockdown, Colony Counts, Myeloperoxidase, Immunostaining, and RT-PCR Assays.

Satya Sree Kolar, Hasna Baidouri, Maria Luisa Mangoni, Alison M McDermott

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 73% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Satya Sree KolarThe Ocular Surface Institute, College of Optometry, University of Houston, 4901 Calhoun Road, Houston, TX, 77204, USA.
Hasna BaidouriThe Ocular Surface Institute, College of Optometry, University of Houston, 4901 Calhoun Road, Houston, TX, 77204, USA.
Maria Luisa MangoniDepartment of Biochemical Sciences "A. Rossi Fanelli", Istituto Pasteur-Fondaziona Cenci Bolognetti, Sapienza University of Rome, Rome, Italy.
Alison M McDermottThe Ocular Surface Institute, College of Optometry, University of Houston, 4901 Calhoun Road, Houston, TX, 77204, USA. AMcdermott@Central.UH.EDU.
University of Houston · USSapienza University of Rome · IT

Funding

Role of Antimicrobial Peptides at the Ocular SurfaceR01EY013175 · NEI · UNIVERSITY OF HOUSTON · PI MCDERMOTT, ALISON M · 2001 to 2016
$4.3M
NEI NIH HHS R01 EY013175
6 · The paper itself

Abstract

Antimicrobial peptides (AMPs) are essential components of the innate immune response. They have direct killing ability as well as immunomodulatory functions. Here, we describe techniques to identify specific AMPs involved in the protection against microbial keratitis, a vision threatening infection of the cornea of the eye which is the most serious complication of contact lens wear. Specifically we detail the use of siRNA technology to temporarily knockdown AMP expression at the murine ocular surface in vivo and then describe ex vivo assays to determine the level of bacteria, relative number of neutrophils, and levels of cytokines, chemokines, and AMPs in infected corneas.

Indexed as

AnimalsAntimicrobial Cationic PeptidesBacterial InfectionsBacterial LoadCytokinesEnzyme ActivationEnzyme-Linked Immunosorbent AssayGene Expression RegulationGene Knockdown TechniquesHost-Pathogen InteractionsInflammation MediatorsKeratitisMiceMicrobial ViabilityNeutrophilsPeroxidaseAntimicrobial Cationic PeptidesCytokinesInflammation MediatorsPeroxidaseRNA, Small InterferingAntimicrobial peptideInflammationKeratitisNeutrophilPseudomonas

Identifiers

PMID28013522
PMCPMC11991856
OpenAlexW2566753769

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.