Evidence map›Paper›PMID 28011766›Full record

ArticleBioinformatics (Oxford, England)2017

Structural insight to mutation effects uncover a common allosteric site in class C GPCRs.

Kasper Harpsøe, Michael W Boesgaard, Christian Munk, Hans Bräuner-Osborne, David E Gloriam

Abstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. The Lateral Metalation of Isoxazolo[3,4-Molecules (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Structural biology of GABANeuropharmacology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kasper Harpsøe
Michael W Boesgaard
Christian Munk
Hans Bräuner-Osborne
David E Gloriam

Funding

European Research Council 639125
6 · The paper itself

Abstract

Motivation: Class C G protein-coupled receptors (GPCRs) regulate important physiological functions and allosteric modulators binding to the transmembrane domain constitute an attractive and, due to a lack of structural insight, a virtually unexplored potential for therapeutics and the food industry. Combining pharmacological site-directed mutagenesis data with the recent class C GPCR experimental structures will provide a foundation for rational design of new therapeutics. Results: We uncover one common site for both positive and negative modulators with different amino acid layouts that can be utilized to obtain selectivity. Additionally, we show a large potential for structure-based modulator design, especially for four orphan receptors with high similarity to the crystal structures. Availability and Implementation: All collated mutagenesis data is available in the GPCRdb mutation browser at http://gpcrdb.org/mutations/ and can be analyzed online or downloaded in excel format. Contact: david.gloriam@sund.ku.dk. Supplementary information: Supplementary data are available at Bioinformatics online.

Indexed as

Allosteric SiteAllosteric RegulationBinding SitesHumansLigandsMutagenesis, Site-DirectedMutationPhylogenyProtein DomainsProtein MultimerizationProtein Structure, SecondaryReceptor, Metabotropic Glutamate 5Receptors, G-Protein-CoupledLigandsReceptor, Metabotropic Glutamate 5Receptors, G-Protein-Coupled

Identifiers

PMID28011766
PMCPMC5408886

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.