Evidence map›Paper›PMID 28011059›Full record

ArticleThe Journal of allergy and clinical immunology2017

Epigenome-wide analysis links SMAD3 methylation at birth to asthma in children of asthmatic mothers.

Avery DeVries, Gabriela Wlasiuk, Susan J Miller, Anthony Bosco, Debra A Stern, I Carla Lohman, Janet Rothers, Anya C Jones, Jessie Nicodemus-Johnson, Monica M Vasquez and 11 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed, 2 pooled it
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 2 syntheses or guidelines pooled it, 136 citations in OpenAlex.

  1. Pooled it
  2. Epigenome-wide meta-analysis of DNA methylation and childhood asthma.The Journal of allergy and clinical immunology · 2019
    Pooled it
  3. Article
  4. Context-specific genetic effects inform endotypes and treatment in asthma.The Journal of allergy and clinical immunology · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Asthma Inception: Epidemiologic Risk Factors and Natural History Across the Life Course.American journal of respiratory and critical care medicine · 2024
    Review
  10. Asthma-Genomic Advances Toward Risk Prediction.Clinics in chest medicine · 2024
    Review
  11. Epigenetic Approaches to Identifying Asthma Endotypes.Allergy, asthma & immunology research · 2024
    Review
  12. Review
  13. Article
  14. Epigenome-wide association studies of allergic disease and the environment.The Journal of allergy and clinical immunology · 2023
    Review
  15. Early Prediction of Asthma.Journal of clinical medicine · 2023
    Review
  16. Article
  17. Review
  18. Article
  19. The role of epigenetics in multi-generational transmission of asthma: An NIAID workshop report-based narrative review.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2022
    Review
  20. Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 4 countries.

Avery DeVriesAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz; Department of Cellular and Molecular Medicine, University of Arizona, Tucson, Ariz.
Gabriela WlasiukAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz.
Susan J MillerArizona Research Laboratories, University of Arizona, Tucson, Ariz.
Anthony BoscoTelethon Kids Institute, University of Western Australia, Perth, Australia.
Debra A SternAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz.
I Carla LohmanAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz.
Janet RothersCollege of Nursing, University of Arizona, Tucson, Ariz.
Anya C JonesTelethon Kids Institute, University of Western Australia, Perth, Australia.
Jessie Nicodemus-JohnsonDepartment of Human Genetics, University of Chicago, Chicago, Ill.
Monica M VasquezAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz.
John A CurtinCentre for Respiratory Medicine and Allergy, Institute of Inflammation and Repair, Manchester Academic Health Science Centre, University of Manchester and University Hospital of South Manchester NHS Foundation Trust, Manchester, United Kingdom.
Angela SimpsonCentre for Respiratory Medicine and Allergy, Institute of Inflammation and Repair, Manchester Academic Health Science Centre, University of Manchester and University Hospital of South Manchester NHS Foundation Trust, Manchester, United Kingdom.
Adnan CustovicCentre for Respiratory Medicine and Allergy, Institute of Inflammation and Repair, Manchester Academic Health Science Centre, University of Manchester and University Hospital of South Manchester NHS Foundation Trust, Manchester, United Kingdom.
Daniel J JacksonDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
James E GernDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
Robert F LemanskeDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
Stefano GuerraAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz; CREAL, University Pompeu Fabra, Barcelona, Spain.
Anne L WrightAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz; Department of Pediatrics, University of Arizona, Tucson, Ariz.
Carole OberDepartment of Human Genetics, University of Chicago, Chicago, Ill.
Marilyn HalonenAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz; Department of Pharmacology, University of Arizona, Tucson, Ariz; Arizona Center for the Biology of Complex Diseases, University of Arizona, Tucson, Ariz; Bio5 Institute, University of Arizona, Tucson, Ariz.
Donata VercelliAsthma and Airway Disease Research Center, University of Arizona, Tucson, Ariz; Department of Cellular and Molecular Medicine, University of Arizona, Tucson, Ariz; Arizona Center for the Biology of Complex Diseases, University of Arizona, Tucson, Ariz; Bio5 Institute, University of Arizona, Tucson, Ariz. Electronic address: donata@email.arizona.edu.
University of Arizona · USUniversity of Wisconsin–Madison · USManchester Academic Health Science Centre · GBThe Kids Research Institute Australia · AUUniversity of Chicago · USPompeu Fabra University · ESUniversity of Manchester · GB

Funding

SOUTHWEST ENVIRONMENTAL HEALTH SCIENCES CENTERP30ES006694 · NIEHS · UNIVERSITY OF ARIZONA · PI DEAN BILLHEIMER · 1994 to 2026
$36.7M
Virus-Bacterial Interactions and Exacerba of AsthmaP01HL070831 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI BOCHKOV, YURY A · 2002 to 2017
$31.3M
MATERNAL INFLUENCES ON CHILDHOOD ASTHMAR01AI042268 · NIAID · UNIVERSITY OF ARIZONA · PI WRIGHT, ANNE L. · 1998 to 2012
$8.1M
Epigenetic predicators of asthma in neonatesRC1HL100800 · NHLBI · UNIVERSITY OF ARIZONA · PI VERCELLI, DONATA · 2009 to 2010
$959k
Medical Research Council G0601361Medical Research Council G1000758Medical Research Council MR/K002449/1Medical Research Council MR/K002449/2NHLBI NIH HHS P01 HL070831NHLBI NIH HHS RC1 HL100800NIAID NIH HHS R01 AI042268NIEHS NIH HHS P30 ES006694
6 · The paper itself

Abstract

backgroundThe timing and mechanisms of asthma inception remain imprecisely defined. Although epigenetic mechanisms likely contribute to asthma pathogenesis, little is known about their role in asthma inception.

objectiveWe sought to assess whether the trajectory to asthma begins already at birth and whether epigenetic mechanisms, specifically DNA methylation, contribute to asthma inception.

methodsWe used the Methylated CpG Island Recovery Assay chip to survey DNA methylation in cord blood mononuclear cells from 36 children (18 nonasthmatic and 18 asthmatic subjects by age 9 years) from the Infant Immune Study (IIS), an unselected birth cohort closely monitored for asthma for a decade. SMAD3 methylation in IIS (n = 60) and in 2 replication cohorts (the Manchester Asthma and Allergy Study [n = 30] and the Childhood Origins of Asthma Study [n = 28]) was analyzed by using bisulfite sequencing or Illumina 450K arrays. Cord blood mononuclear cell-derived IL-1β levels were measured by means of ELISA.

resultsNeonatal immune cells harbored 589 differentially methylated regions that distinguished IIS children who did and did not have asthma by age 9 years. In all 3 cohorts methylation in SMAD3, the most connected node within the network of asthma-associated, differentially methylated regions, was selectively increased in asthmatic children of asthmatic mothers and was associated with childhood asthma risk. Moreover, SMAD3 methylation in IIS neonates with maternal asthma was strongly and positively associated with neonatal production of IL-1β, an innate inflammatory mediator.

conclusionsThe trajectory to childhood asthma begins at birth and involves epigenetic modifications in immunoregulatory and proinflammatory pathways. Maternal asthma influences epigenetic mechanisms that contribute to the inception of this trajectory.

Indexed as

AsthmaChildChild, PreschoolCpG IslandsDNA MethylationEpigenesis, GeneticFetal BloodHumansInfant, NewbornInterleukin-1betaLeukocytes, MononuclearMothersPromoter Regions, GeneticSmad3 ProteinInterleukin-1betaSmad3 ProteinSMAD3 protein, humanchildhood asthmaDNA methylationEpigeneticsSMAD3

Identifiers

PMID28011059
PMCPMC5479765
OpenAlexW2563730257

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.