Evidence map›Paper›PMID 28009001›Full record

Trial reportScientific reports2016

Real-time qPCR improves meningitis pathogen detection in invasive bacterial-vaccine preventable disease surveillance in Fiji.

Eileen M Dunne, Silivia Mantanitobua, Shalini P Singh, Rita Reyburn, Evelyn Tuivaga, Eric Rafai, Lisi Tikoduadua, Barbara Porter, Catherine Satzke, Janet E Strachan and 7 more

Abstract readClinical Trial
In one paragraph

Trial report in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Observational
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. [Advances in diagnostic microbiology : Opportunities and limitations].Medizinische Klinik, Intensivmedizin und Notfallmedizin · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Eileen M DunneMurdoch Childrens Research Institute, Infection and Immunity, Parkville, 3052, Australia.
Silivia MantanitobuaMinistry of Health &Medical Services, Suva, Fiji.
Shalini P SinghMinistry of Health &Medical Services, Suva, Fiji.
Rita ReyburnMurdoch Childrens Research Institute, Infection and Immunity, Parkville, 3052, Australia.
Evelyn TuivagaMinistry of Health &Medical Services, Suva, Fiji.
Eric RafaiMinistry of Health &Medical Services, Suva, Fiji.
Lisi TikoduaduaMinistry of Health &Medical Services, Suva, Fiji.
Barbara PorterMurdoch Childrens Research Institute, Infection and Immunity, Parkville, 3052, Australia.
Catherine SatzkeMurdoch Childrens Research Institute, Infection and Immunity, Parkville, 3052, Australia.
Janet E StrachanThe University of Melbourne, Microbiological Diagnostic Unit Public Health Laboratory, Melbourne, 3000, Australia.
Kimberly K FoxWorld Health Organization Regional Office for the Western Pacific, Manila, Philippines.
Kylie M JenkinsFiji Health Sector Support Program, Suva, Fiji.
Adam JenneyMurdoch Childrens Research Institute, Infection and Immunity, Parkville, 3052, Australia.
Silo BaroMinistry of Health &Medical Services, Suva, Fiji.
E Kim MulhollandMurdoch Childrens Research Institute, Infection and Immunity, Parkville, 3052, Australia.
Mike KamaMinistry of Health &Medical Services, Suva, Fiji.
Fiona M RussellMurdoch Childrens Research Institute, Infection and Immunity, Parkville, 3052, Australia.

Funding

World Health Organization 001
6 · The paper itself

Abstract

As part of the World Health Organization Invasive Bacterial-Vaccine Preventable Diseases (IB-VPD) surveillance in Suva, Fiji, cerebrospinal fluid (CSF) samples from suspected meningitis patients of all ages were examined by traditional methods (culture, Gram stain, and latex agglutination for bacterial antigen) and qPCR for Streptococcus pneumoniae, Neisseria meningitidis, and Haemophilus influenzae. Of 266 samples tested, pathogens were identified in 47 (17.7%). S. pneumoniae was the most common pathogen detected (n = 17) followed by N. meningitidis (n = 13). The use of qPCR significantly increased detection of IB-VPD pathogens (P = 0.0001): of 35 samples that were qPCR positive for S. pneumoniae, N. meningitidis, and H. influenzae, only 10 were culture positive. This was particularly relevant for N. meningitidis, as only 1/13 cases was culture positive. Molecular serotyping by microarray was used to determine pneumococcal serotypes from 9 of 16 (56%) of samples using DNA directly extracted from CSF specimens. Results indicate that qPCR significantly increases detection of S. pneumoniae, N. meningitidis, and H. influenzae in CSF, and that application of molecular diagnostics is a feasible way to enhance local and global surveillance for IB-VPD.

Indexed as

Meningitis, BacterialAdolescentAdultBacterial VaccinesChildChild, PreschoolFemaleFijiHaemophilus influenzaeHumansInfantInfant, NewbornMaleNeisseria meningitidisReal-Time Polymerase Chain ReactionStreptococcus pneumoniaeBacterial Vaccines

Identifiers

PMID28009001
PMCPMC5180226

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.