Evidence map›Paper›PMID 28008001›Full record

ArticlePlant physiology2017

Detainment of Tam3 Transposase at Plasma Membrane by Its BED-Zinc Finger Domain.

Hua Zhou, Megumi Hirata, Ryo Osawa, Kaien Fujino, Yuji Kishima

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hua ZhouResearch Faculty of Agriculture, Hokkaido University, Sapporo 060-8589, Japan.
Megumi HirataResearch Faculty of Agriculture, Hokkaido University, Sapporo 060-8589, Japan.
Ryo OsawaResearch Faculty of Agriculture, Hokkaido University, Sapporo 060-8589, Japan.
Kaien FujinoResearch Faculty of Agriculture, Hokkaido University, Sapporo 060-8589, Japan.
Yuji KishimaResearch Faculty of Agriculture, Hokkaido University, Sapporo 060-8589, Japan kishima@abs.agr.hokudai.ac.jp.ORCID 0000-0002-0942-3371
Hokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transposable elements (TEs) are considered to be parasites of host genomes because they act as powerful mutagens. If not kept in check, they can cause gene disruption, genome rearrangement, and genomic takeover. Hence, activities of TEs are under the rigid control of hosts. To date, all identified TE regulations have been epigenetic dependent, with the exception of the DNA transposon Tam3. Blocking nuclear translocation of Tam3 transposase (TPase) is consistent with the suppression of Tam3 in Antirrhinum majus In this article, we discovered that epigenetic-independent regulation of Tam3 is mediated by the BED-zinc finger (Znf-BED) domain of Tam3 TPase. The host targets the N terminus of the Znf-BED domain, which contains two highly conserved aromatic amino acids, to detain Tam3 TPase at the plasma membrane and to silence Tam3. Zinc finger proteins perform broader functions in transcriptional regulation through their DNA binding ability. Our data revealed that the posttranslational epigenetic-independent silencing against TEs was a result of the protein binding ability of the Znf-BED domain.

Indexed as

Zinc FingersAmino Acid SequenceAntirrhinumCell MembraneConserved SequenceDNA Transposable ElementsEpigenesis, GeneticPlant ProteinsRecombinant Fusion ProteinsTransposasesDNA Transposable ElementsPlant ProteinsRecombinant Fusion ProteinsTransposases

Identifiers

PMID28008001
PMCPMC5291012
OpenAlexW2563539740

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.