Evidence map›Paper›PMID 28005936›Full record

ArticlePloS one2016

Prevalence and Genetic Diversity of Avipoxvirus in House Sparrows in Spain.

Jorge Ruiz-Martínez, Martina Ferraguti, Jordi Figuerola, Josué Martínez-de la Puente, Richard Alexander John Williams, Amparo Herrera-Dueñas, José Ignacio Aguirre, Ramón Soriguer, Clara Escudero, Michaël André Jean Moens and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jorge Ruiz-MartínezDepartamento de Microbiología III, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
Martina FerragutiEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas, Sevilla, Spain.
Jordi FiguerolaEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas, Sevilla, Spain.
Josué Martínez-de la PuenteEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas, Sevilla, Spain.
Richard Alexander John WilliamsDepartamento de Zoología y Antropología Física, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
Amparo Herrera-DueñasDepartamento de Zoología y Antropología Física, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
José Ignacio AguirreDepartamento de Zoología y Antropología Física, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
Ramón SoriguerEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas, Sevilla, Spain.
Clara EscuderoDepartamento de Microbiología III, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
Michaël André Jean MoensDepartamento de Zoología y Antropología Física, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
Javier Pérez-TrisDepartamento de Zoología y Antropología Física, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
Laura BenítezDepartamento de Microbiología III, Facultad de Biología, Universidad Complutense de Madrid, Madrid, Spain.
Universidad Complutense de Madrid · ESCentro de Investigación Biomédica en Red de Epidemiología y Salud Pública · ESConsejo Superior de Investigaciones Científicas · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avipoxvirus (APV) is a fairly common virus affecting birds that causes morbidity and mortality in wild and captive birds. We studied the prevalence of pox-like lesions and genetic diversity of APV in house sparrows (Passer domesticus) in natural, agricultural and urban areas in southern Spain in 2013 and 2014 and in central Spain for 8 months (2012-2013). Overall, 3.2% of 2,341 house sparrows visually examined in southern Spain had cutaneous lesions consistent with avian pox. A similar prevalence (3%) was found in 338 birds from central Spain. Prevalence was higher in hatch-year birds than in adults. We did not detect any clear spatial or temporal patterns of APV distribution. Molecular analyses of poxvirus-like lesions revealed that 63% of the samples were positive. Molecular and phylogenetic analyses of 29 DNA sequences from the fpv167 gene, detected two strains belonging to the canarypox clade (subclades B1 and B2) previously found in Spain. One of them appears predominant in Iberia and North Africa and shares 70% similarity to fowlpox and canarypox virus. This APV strain has been identified in a limited number of species in the Iberian Peninsula, Morocco and Hungary. The second one has a global distribution and has been found in numerous wild bird species around the world. To our knowledge, this represents the largest study of avian poxvirus disease in the broadly distributed house sparrow and strongly supports the findings that Avipox prevalence in this species in South and central Spain is moderate and the genetic diversity low.

Indexed as

AnimalsAntibodies, ViralAvipoxvirusBird DiseasesGenetic VariationPhylogenyPoxviridae InfectionsPrevalenceSpainSparrowsViral ProteinsAntibodies, ViralViral Proteins

Identifiers

PMID28005936
PMCPMC5179100
OpenAlexW2570251630

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.