Evidence map›Paper›PMID 28004871›Full record

ArticleThe Plant journal : for cell and molecular biology2017

The iron-sulfur cluster biosynthesis protein SUFB is required for chlorophyll synthesis, but not phytochrome signaling.

Xueyun Hu, Mike T Page, Akihiro Sumida, Ayumi Tanaka, Matthew J Terry, Ryouichi Tanaka

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 48 citations in OpenAlex.

  1. Growth response ofIranian journal of microbiology · 2024
    Article
  2. Article
  3. TheeLife · 2023
    Article
  4. Article
  5. Review
  6. Zinc toxicity response inFrontiers in plant science · 2022
    Article
  7. Supraoptimal Iron Nutrition ofFrontiers in plant science · 2021
    Article
  8. Article
  9. Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Xueyun HuInstitute of Low Temperature Science, Hokkaido University, Sapporo, 060-0819, Japan.
Mike T PageBiological Sciences, University of Southampton, Southampton, UK.
Akihiro SumidaInstitute of Low Temperature Science, Hokkaido University, Sapporo, 060-0819, Japan.
Ayumi TanakaInstitute of Low Temperature Science, Hokkaido University, Sapporo, 060-0819, Japan.
Matthew J TerryBiological Sciences, University of Southampton, Southampton, UK.
Ryouichi TanakaInstitute of Low Temperature Science, Hokkaido University, Sapporo, 060-0819, Japan.
Hokkaido University · JPUniversity of Southampton · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins that contain iron-sulfur (Fe-S) clusters play pivotal roles in various metabolic processes such as photosynthesis and redox metabolism. Among the proteins involved in the biosynthesis of Fe-S clusters in plants, the SUFB subunit of the SUFBCD complex appears to be unique because SUFB has been reported to be involved in chlorophyll metabolism and phytochrome-mediated signaling. To gain insights into the function of the SUFB protein, we analyzed the phenotypes of two SUFB mutants, laf6 and hmc1, and RNA interference (RNAi) lines with reduced SUFB expression. When grown in the light, the laf6 and hmc1 mutants and the SUFB RNAi lines accumulated higher levels of the chlorophyll biosynthesis intermediate Mg-protoporphyrin IX monomethylester (Mg-proto MME), consistent with the impairment of Mg-proto MME cyclase activity. Both SUFC- and SUFD-deficient RNAi lines accumulated the same intermediate, suggesting that inhibition of Fe-S cluster synthesis is the primary cause of this impairment. Dark-grown laf6 seedlings also showed an increase in protoporphyrin IX (Proto IX), Mg-proto, Mg-proto MME and 3,8-divinyl protochlorophyllide a (DV-Pchlide) levels, but this was not observed in hmc1 or the SUFB RNAi lines, nor was it complemented by SUFB overexpression. In addition, the long hypocotyl in far-red light phenotype of the laf6 mutant could not be rescued by SUFB overexpression and segregated from the pale-green SUFB-deficient phenotype, indicating it is not caused by mutation at the SUFB locus. These results demonstrate that biosynthesis of Fe-S clusters is important for chlorophyll biosynthesis, but that the laf6 phenotype is not due to a SUFB mutation.

Indexed as

ArabidopsisArabidopsis ProteinsChlorophyllChloroplastsLightPhytochromeRNA InterferenceSignal TransductionArabidopsis ProteinsChlorophyllPhytochromeArabidopsis thalianachlorophyll biosynthesischloroplastfar-red lightFe-S clusterMg-protoporphyrin monomethyl ester cyclase

Identifiers

PMID28004871
PMCPMC5347852
OpenAlexW2566656939

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.