Evidence map›Paper›PMID 28004641›Full record

ArticlePhysical biology2017

Understanding spatial and temporal patterning of astrocyte calcium transients via interactions between network transport and extracellular diffusion.

E Shtrahman, D Maruyama, E Olariu, C G Fink, M Zochowski

Abstract read
In one paragraph

Article in Physical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Astrocyte and Alzheimer's disease.Journal of neurology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

E ShtrahmanApplied Physics Program, University of Michigan, Ann Arbor, MI 48109, USA.
D MaruyamaDepartment of Physics, University of Michigan, Ann Arbor, MI 48109, USA.
E OlariuDepartment of Physics, University of Michigan, Ann Arbor, MI 48109, USA.
C G FinkDepartment of Physics, Ohio Wesleyan University, Delaware, OH 43015, USA.
M ZochowskiDepartment of Physics, University of Michigan, Ann Arbor, MI 48109, USA.

Funding

Characterizing High Frequency Oscillations as an epilepsy biomarker with Big Data toolsR01NS094399 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI STACEY, WILLIAM CHARLES · 2015 to 2025
$4.1M
Understanding Functional Network Reorganization During the Information ProcessingR01EB018297 · NIBIB · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZOCHOWSKI, MICHAL R · 2014 to 2017
$1.4M
NIBIB NIH HHS R01 EB018297NINDS NIH HHS R01 NS094399
6 · The paper itself

Abstract

Astrocytes form interconnected networks in the brain and communicate via calcium signaling. We investigate how modes of coupling between astrocytes influence the spatio-temporal patterns of calcium signaling within astrocyte networks and specifically how these network interactions promote coordination within this group of cells. To investigate these complex phenomena, we study reduced cultured networks of astrocytes and neurons. We image the spatial temporal patterns of astrocyte calcium activity and quantify how perturbing the coupling between astrocytes influences astrocyte activity patterns. To gain insight into the pattern formation observed in these cultured networks, we compare the experimentally observed calcium activity patterns to the patterns produced by a reduced computational model, where we represent astrocytes as simple units that integrate input through two mechanisms: gap junction coupling (network transport) and chemical release (extracellular diffusion). We examine the activity patterns in the simulated astrocyte network and their dependence upon these two coupling mechanisms. We find that gap junctions and extracellular chemical release interact in astrocyte networks to modulate the spatiotemporal patterns of their calcium dynamics. We show agreement between the computational and experimental findings, which suggests that the complex global patterns can be understood as a result of simple local coupling mechanisms.

Indexed as

Calcium SignalingAnimalsAstrocytesBiological TransportCalciumCell CommunicationCells, CulturedComputer SimulationDiffusionGap JunctionsModels, NeurologicalRats, WistarCalcium

Identifiers

PMID28004641
PMCPMC5333993

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.