Evidence map›Paper›PMID 28004240›Full record

ArticlePlant molecular biology2017

Silencing of an α-dioxygenase gene, Ca-DOX, retards growth and suppresses basal disease resistance responses in Capsicum annum.

Chi Eun Hong, Young-Im Ha, Hyoju Choi, Ju Yeon Moon, Jiyoung Lee, Ah-Young Shin, Chang Jin Park, Gyeong Mee Yoon, Suk-Yoon Kwon, Ick-Hyun Jo and 1 more

Abstract read
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Article in Plant molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Chi Eun HongPlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea.
Young-Im HaPlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea.
Hyoju ChoiPlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea.
Ju Yeon MoonPlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea.
Jiyoung LeePlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea.
Ah-Young ShinPlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea.
Chang Jin ParkDepartment of Bioresources Engineering, Sejong University, Seoul, 05006, South Korea.
Gyeong Mee YoonDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, 47907, USA.
Suk-Yoon KwonPlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea.
Ick-Hyun JoDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong, 27709, South Korea.
Jeong Mee ParkPlant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Deajeon, 34141, South Korea. jmpark@kribb.re.kr.
Korea Research Institute of Bioscience and Biotechnology · KRKorea University of Science and Technology · KRRural Development Administration · KRPurdue University West Lafayette · USSejong University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alpha-dioxygenases (α-DOX) catalyzing the primary oxygenation of fatty acids to oxylipins were recently found in plants. Here, the biological roles of the pepper α-DOX (Ca-DOX) gene, which is strongly induced during non-host pathogen infection in chili pepper, were examined. Virus-induced gene silencing demonstrated that down-regulation of Ca-DOX enhanced susceptibility to bacterial pathogens and suppressed the hypersensitive response via the suppression of pathogenesis-related genes such as PR4, proteinase inhibitor II and lipid transfer protein (PR14). Ca-DOX-silenced pepper plants also exhibited more retarded growth with lower epidermal cell numbers and reduced cell wall thickness than control plants. To better understand regulation of Ca-DOX, transgenic Arabidopsis plants harboring the β-glucuronidase (GUS) reporter gene driven from a putative Ca-DOX promoter were generated. GUS expression was significantly induced upon avirulent pathogen infection in transgenic Arabidopsis leaves, whereas GUS induction was relatively weak upon virulent pathogen treatment. After treatment with plant hormones, early and strong GUS expression was seen after treatment of salicylic acid, whereas ethylene and methyl jasmonate treatments produced relatively weak and late GUS signals. These results will enable us to further understand the role of α-DOX, which is important in lipid metabolism, defense responses, and growth development in plants.

Indexed as

Gene SilencingAmino Acid SequenceCapsicumDioxygenasesDisease ResistanceGene Expression Regulation, PlantHost-Pathogen InteractionsMicroscopy, Electron, TransmissionPlant DiseasesPlant Growth RegulatorsPlant LeavesPlant ProteinsPlants, Genetically ModifiedPseudomonas syringaeReverse Transcriptase Polymerase Chain ReactionSequence Homology, Amino AcidDioxygenasesPlant Growth RegulatorsPlant ProteinsAlpha-DOXBasal defense responseChili pepperOxylipinPromoterVIGS

Identifiers

PMID28004240
OpenAlexW2562708161

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.