Evidence map›Paper›PMID 28004160›Full record

ArticleEuropean radiology2017

Noninvasive IDH1 mutation estimation based on a quantitative radiomics approach for grade II glioma.

Jinhua Yu, Zhifeng Shi, Yuxi Lian, Zeju Li, Tongtong Liu, Yuan Gao, Yuanyuan Wang, Liang Chen, Ying Mao

Registry-linked trialAbstract read
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In one paragraph

Article in European radiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05739500 (The Clinical Trial 01 to Evaluate the Effectiveness of MRI-based Computer Aided Diagnosis Software), which is not on this map. Cited by 106 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05739500 unknown statusnot on this mapstarted 2022, after this paper: background citation

The Clinical Trial 01 to Evaluate the Effectiveness of MRI-based Computer Aided Diagnosis Software (V1) for Glioma Segmentation, Gene Prediction and Tumor Grading

TypeobservationalSponsorMingge LLCRan2022 to 2025Enrolled250ConditionsGlioma, Primary Brain Tumor
3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 6 syntheses or guidelines pooled it.

  1. Pooled it
  2. Noninvasive Determination ofAJNR. American journal of neuroradiology · 2021
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  18. Deep Learning: A Primer for Neurosurgeons.Advances in experimental medicine and biology · 2024
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46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jinhua YuDepartment of Electronic Engineering, Fudan University, Shanghai, China.
Zhifeng ShiDepartment of Neurosurgery, Huashan Hospital, Fudan University, Shanghai, China.
Yuxi LianDepartment of Electronic Engineering, Fudan University, Shanghai, China.
Zeju LiDepartment of Electronic Engineering, Fudan University, Shanghai, China.
Tongtong LiuDepartment of Electronic Engineering, Fudan University, Shanghai, China.
Yuan GaoDepartment of Electronic Engineering, Fudan University, Shanghai, China.
Yuanyuan WangDepartment of Electronic Engineering, Fudan University, Shanghai, China. yywang@fudan.edu.cn.
Liang ChenDepartment of Neurosurgery, Huashan Hospital, Fudan University, Shanghai, China. clclcl95@sina.com.
Ying MaoDepartment of Neurosurgery, Huashan Hospital, Fudan University, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe status of isocitrate dehydrogenase 1 (IDH1) is highly correlated with the development, treatment and prognosis of glioma. We explored a noninvasive method to reveal IDH1 status by using a quantitative radiomics approach for grade II glioma.

methodsA primary cohort consisting of 110 patients pathologically diagnosed with grade II glioma was retrospectively studied. The radiomics method developed in this paper includes image segmentation, high-throughput feature extraction, radiomics sequencing, feature selection and classification. Using the leave-one-out cross-validation (LOOCV) method, the classification result was compared with the real IDH1 situation from Sanger sequencing. Another independent validation cohort containing 30 patients was utilised to further test the method.

resultsA total of 671 high-throughput features were extracted and quantized. 110 features were selected by improved genetic algorithm. In LOOCV, the noninvasive IDH1 status estimation based on the proposed approach presented an estimation accuracy of 0.80, sensitivity of 0.83 and specificity of 0.74. Area under the receiver operating characteristic curve reached 0.86. Further validation on the independent cohort of 30 patients produced similar results.

conclusionsRadiomics is a potentially useful approach for estimating IDH1 mutation status noninvasively using conventional T2-FLAIR MRI images. The estimation accuracy could potentially be improved by using multiple imaging modalities. KEY POINTS: • Noninvasive IDH1 status estimation can be obtained with a radiomics approach. • Automatic and quantitative processes were established for noninvasive biomarker estimation. • High-throughput MRI features are highly correlated to IDH1 states. • Area under the ROC curve of the proposed estimation method reached 0.86.

Indexed as

MutationAdolescentAdultAgedBiomarkers, TumorBrain NeoplasmsChildChild, PreschoolCohort StudiesFemaleGliomaHumansImage Interpretation, Computer-AssistedInfantInfant, NewbornIsocitrate DehydrogenaseBiomarkers, TumorIDH1 protein, humanIsocitrate DehydrogenaseNeoplasm ProteinsGrade II gliomaIsocitrate dehydrogenase 1Magnetic resonance imagingNoninvasive biomarker estimationRadiomics

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.