Evidence map›Paper›PMID 28004134›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017

Genetic analysis and mapping of adult plant resistance loci to leaf rust in durum wheat cultivar Bairds.

Caixia Lan, Bhoja R Basnet, Ravi P Singh, Julio Huerta-Espino, Sybil A Herrera-Foessel, Yong Ren, Mandeep S Randhawa

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Fine-mapping of LrN3B on wheat chromosome arm 3BS, one of the two complementary genes for adult-plant leaf rust resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
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  3. Article
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  6. Genome-wide association mapping of leaf rust and stripe rust resistance in wheat accessions using the 90K SNP array.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  7. Review
  8. A durum wheat adult plant stripe rust resistance QTL and its relationship with the bread wheat Yr80 locus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Caixia LanInternational Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600, Texcoco, México D.F., Mexico. c.lan@cgiar.org.ORCID http://orcid.org/0000-0001-8436-9486
Bhoja R BasnetInternational Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600, Texcoco, México D.F., Mexico.
Ravi P SinghInternational Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600, Texcoco, México D.F., Mexico.
Julio Huerta-EspinoCampo Experimental Valle de México INIFAP, Apdo. Postal 10, 56230, Chapingo, Texcoco, Edo. de México, Mexico.
Sybil A Herrera-FoesselInternational Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600, Texcoco, México D.F., Mexico.
Yong RenMianyang Institute of Agricultural Science/Mianyang Branch of National Wheat Improvement Center, 8 Songjiang Road, Mianyang, 621023, Sichuan, People's Republic of China.
Mandeep S RandhawaInternational Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6-641, 06600, Texcoco, México D.F., Mexico.
Centro Internacional de Mejoramiento de Maíz Y Trigo · MXInstituto Nacional de Investigaciones Forestales Agrícolas y Pecuarias · MXSichuan Mianyang 404 Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageNew leaf rust adult plant resistance (APR) QTL QLr.cim - 6BL was mapped and confirmed the known pleotropic APR gene Lr46 effect on leaf rust in durum wheat line Bairds. CIMMYT-derived durum wheat line Bairds displays an adequate level of adult plant resistance (APR) to leaf rust in Mexican field environments. A recombinant inbred line (RIL) population developed from a cross of Bairds with susceptible parent Atred#1 was phenotyped for leaf rust response at Ciudad Obregon, Mexico, during 2013, 2014, 2015 and 2016 under artificially created epidemics of Puccinia triticina (Pt) race BBG/BP. The RIL population and its parents were genotyped with the 50 K diversity arrays technology (DArT) sequence system and simple sequence repeat (SSR) markers. A genetic map comprising 1150 markers was used to map the resistance loci. Four significant quantitative trait loci (QTLs) were detected on chromosomes 1BL, 2BC (centromere region), 5BL and 6BL. These QTLs, named Lr46, QLr.cim-2BC, QLr.cim-5BL and QLr.cim-6BL, respectively, explained 13.5-60.8%, 9.0-14.3%, 2.8-13.9%, and 11.6-29.4%, respectively, of leaf rust severity variation by the inclusive composite interval mapping method. All of these resistance loci were contributed by the resistant parent Bairds, except for QLr.cim-2BC, which came from susceptible parent Atred#1. Among these, the QTL on chromosome 1BL was the known pleiotropic APR gene Lr46, whereas QLr.cim-6BL, a consistently detected locus, should be a new leaf rust resistance locus in durum wheat. The mean leaf rust severity of RILs carrying all four QTLs ranged from 8.0 to 17.5%, whereas it ranged from 10.9 to 38.5% for three QTLs (Lr46 + 5BL + 6BL) derived from the resistant parent Bairds. Two RILs with four QTLs combinations can be used as sources of complex APR in durum wheat breeding.

Indexed as

Genes, PlantBasidiomycotaChromosome MappingDisease ResistanceDNA, PlantGenetic LinkageGenetic MarkersGenotypeMicrosatellite RepeatsPhenotypePlant BreedingPlant DiseasesQuantitative Trait LociTriticumDNA, PlantGenetic Markers

Identifiers

PMID28004134
OpenAlexW2564650492

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.