Evidence map›Paper›PMID 28004024›Full record

ArticleData in brief2017

Transcriptomes of bovine ovarian follicular and luteal cells.

Sarah M Romereim, Adam F Summers, William E Pohlmeier, Pan Zhang, Xiaoying Hou, Heather A Talbott, Robert A Cushman, Jennifer R Wood, John S Davis, Andrea S Cupp

Open access · goldAbstract read
In one paragraph

Article in Data in brief, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Unraveling the role of lipid droplets and perilipin 2 in bovine luteal cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  2. Article
  3. Review
  4. Article
  5. Trafficking of cholesterol from lipid droplets to mitochondria in bovine luteal cells: Acute control of progesterone synthesis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  6. Article
  7. Data in brief · 2018
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Sarah M RomereimUniversity of Nebraska-Lincoln; Animal Science, P.O. Box 830908, C203 ANSC, Lincoln, NE 68583-0908, USA.
Adam F SummersUniversity of Nebraska-Lincoln; Animal Science, P.O. Box 830908, C203 ANSC, Lincoln, NE 68583-0908, USA.
William E PohlmeierUniversity of Nebraska-Lincoln; Animal Science, P.O. Box 830908, C203 ANSC, Lincoln, NE 68583-0908, USA.
Pan ZhangUniversity of Nebraska Medical Center; 983255 Nebraska Medical Center, Omaha, NE 68198-3255, USA.
Xiaoying HouUniversity of Nebraska Medical Center; 983255 Nebraska Medical Center, Omaha, NE 68198-3255, USA.
Heather A TalbottUniversity of Nebraska Medical Center; 983255 Nebraska Medical Center, Omaha, NE 68198-3255, USA.
Robert A CushmanUSDA, ARS, US Meat Animal Research Center, Nutrition and Environmental Management Research, Spur 18D, Clay Center, NE 68933, USA.
Jennifer R WoodUniversity of Nebraska-Lincoln; Animal Science, P.O. Box 830908, C203 ANSC, Lincoln, NE 68583-0908, USA.
John S DavisUniversity of Nebraska Medical Center; 983255 Nebraska Medical Center, Omaha, NE 68198-3255, USA; VA Nebraska-Western Iowa Health Care System, Omaha, NE 68105, USA.
Andrea S CuppUniversity of Nebraska-Lincoln; Animal Science, P.O. Box 830908, C203 ANSC, Lincoln, NE 68583-0908, USA.
University of Nebraska–Lincoln · USUniversity of Nebraska Medical Center · USNebraska Medical Center · USRoman L. Hruska U.S. Meat Animal Research Center · US

Funding

UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PAUL L SORGEN · 2012 to 2026
$59.2M
UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Joann B. Sweasy · 1985 to 2026
$55.0M
UNMC Histology/Imaging and Creighton University Imaging Core FacilityP30GM110768 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SMITH, SHELLEY D · 2014 to 2018
$5.1M
Research Pilot Project ProgramP30GM106397 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI JOHNSON, KEITH R · 2013 to 2017
$4.9M
NCI NIH HHS P30 CA036727NIGMS NIH HHS P20 GM103427NIGMS NIH HHS P30 GM106397NIGMS NIH HHS P30 GM110768
6 · The paper itself

Abstract

Affymetrix Bovine GeneChip® Gene 1.0 ST Array RNA expression analysis was performed on four somatic ovarian cell types: the granulosa cells (GCs) and theca cells (TCs) of the dominant follicle and the large luteal cells (LLCs) and small luteal cells (SLCs) of the corpus luteum. The normalized linear microarray data was deposited to the NCBI GEO repository (GSE83524). Subsequent ANOVA determined genes that were enriched (≥2 fold more) or decreased (≤-2 fold less) in one cell type compared to all three other cell types, and these analyzed and filtered datasets are presented as tables. Genes that were shared in enriched expression in both follicular cell types (GCs and TCs) or in both luteal cells types (LLCs and SLCs) are also reported in tables. The standard deviation of the analyzed array data in relation to the log of the expression values is shown as a figure. These data have been further analyzed and interpreted in the companion article "Gene expression profiling of ovarian follicular and luteal cells provides insight into cellular identities and functions" (Romereim et al., 2017) [1].

Identifiers

PMID28004024
PMCPMC5157705
OpenAlexW2560464535

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.