Evidence map›Paper›PMID 28003349›Full record

ArticleThe Journal of infectious diseases2017

Assessment and Optimization of the GeneXpert Diagnostic Platform for Detection of Ebola Virus RNA in Seminal Fluid.

James Pettitt, Elizabeth Higgs, Mosoka Fallah, Martha Nason, Eric Stavale, Jonathan Marchand, Cavan Reilly, Kenneth Jensen, Bonnie Dighero-Kemp, Kaylie Tuznik and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. A Longitudinal Study of Ebola Sequelae in Liberia.The New England journal of medicine · 2019
    Article
  11. The current landscape of nucleic acid tests for filovirus detection.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2018
    Review
  12. Article
  13. Collaboration of the NIH and PHS Commissioned Corps in the International Ebola Clinical Research Response.Federal practitioner : for the health care professionals of the VA, DoD, and PHS · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

James PettittIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
Elizabeth HiggsDivision of Clinical Research, National Institute of Allergy and Infectious Diseases, Bethesda, Maryland, USA.
Mosoka FallahMinistry of Health and Welfare, Monrovia, Liberia.
Martha NasonBiostatistics Research Branch, Division of Clinical Research, National Institute of Allergy and Infectious Diseases, Bethesda, USA.
Eric StavaleIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
Jonathan MarchandIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
Cavan ReillyDivision of Biostatistics, University of Minnesota School of Public Health, Minnesota, USA.
Kenneth JensenIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
Bonnie Dighero-KempIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
Kaylie TuznikIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
James LogueIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
Fatorma BolayLiberian Institute of Biomedical Research, Charlesville, Liberia.
Lisa HensleyIntegrated Research Facility, National Institute of Allergy and Infectious Diseases, Fort Detrick, MD, USA.
National Institute of Allergy and Infectious Diseases · USLiberian Institute for Biomedical Research · LRMinistry of Health and Social Welfare · LRUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent studies have suggested that Ebola virus (EBOV) ribonucleic acid (RNA) potentially present in the semen of a large number of survivors of Ebola virus disease (EVD) in Western Africa may contribute to sexual transmission of EVD and generate new clusters of cases in regions previously declared EVD-free. These findings drive the immediate need for a reliable, rapid, user-friendly assay for detection of EBOV RNA in semen that is deployable to multiple sites across Western Africa. In this study, we optimized the Xpert EBOV assay for semen samples by adding dithiothreitol. Compared to the assays currently in use in Liberia (including Ebola Zaire Target 1, major groove binder real-time-polymerase chain reaction assays, and original Xpert EBOV assay), the modified Xpert EBOV assay demonstrated greater sensitivity than the comparator assays. Thus, the modified Xpert EBOV assay is optimal for large-scale monitoring of EBOV RNA persistence in male survivors.

Indexed as

Democratic Republic of the CongoEbolavirusHemorrhagic Fever, EbolaHumansLiberiaLimit of DetectionMalePilot ProjectsReal-Time Polymerase Chain ReactionRNA, ViralSemenSensitivity and SpecificitySurvivorsRNA, ViralDiagnostics TestEbola virusfilovirusesRNASemenSurvivorsViral persistence

Identifiers

PMID28003349
PMCPMC6075475
OpenAlexW2564650144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.