Evidence map›Paper›PMID 28003192›Full record

ArticleApplied and environmental microbiology2017

Mineral Types and Tree Species Determine the Functional and Taxonomic Structures of Forest Soil Bacterial Communities.

Y Colin, O Nicolitch, M-P Turpault, S Uroz

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 63 citations in OpenAlex.

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  9. Plants (Basel, Switzerland) · 2023
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Y ColinINRA, Université de Lorraine, UMR 1136 Interactions Arbres Micro-organismes, Centre INRA de Nancy, Champenoux, France.
O NicolitchINRA, Université de Lorraine, UMR 1136 Interactions Arbres Micro-organismes, Centre INRA de Nancy, Champenoux, France.
M-P TurpaultINRA UR 1138 Biogéochimie des Ecosystèmes Forestiers, Centre INRA de Nancy, Champenoux, France.
S UrozINRA, Université de Lorraine, UMR 1136 Interactions Arbres Micro-organismes, Centre INRA de Nancy, Champenoux, France stephane.uroz@inra.fr.
Interactions Arbres-Microorganismes · FRUniversité de Lorraine · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although minerals represent important soil constituents, their impact on the diversity and structure of soil microbial communities remains poorly documented. In this study, pure mineral particles with various chemistries (i.e., obsidian, apatite, and calcite) were considered. Each mineral type was conditioned in mesh bags and incubated in soil below different tree stands (beech, coppice with standards, and Corsican pine) for 2.5 years to determine the relative impacts of mineralogy and mineral weatherability on the taxonomic and functional diversities of mineral-associated bacterial communities. After this incubation period, the minerals and the surrounding bulk soil were collected to determine mass loss and to perform soil analyses, enzymatic assays, and cultivation-dependent and -independent analyses. Notably, our 16S rRNA gene pyrosequencing analyses revealed that after the 2.5-year incubation period, the mineral-associated bacterial communities strongly differed from those of the surrounding bulk soil for all tree stands considered. When focusing only on minerals, our analyses showed that the bacterial communities associated with calcite, the less recalcitrant mineral type, significantly differed from those that colonized obsidian and apatite minerals. The cultivation-dependent analysis revealed significantly higher abundances of effective mineral-weathering bacteria on the most recalcitrant minerals (i.e., apatite and obsidian). Together, our data showed an enrichment of

Indexed as

ForestsMicrobial ConsortiaSoil MicrobiologyBacteriaBetaproteobacteriaBiodiversityBurkholderiaDNA, BacterialEcosystemFranceMineralsOxalobacteraceaePhylogenyRNA, Ribosomal, 16SSoilSpecies SpecificityDNA, BacterialMineralsRNA, Ribosomal, 16SSoilbacterial communitiesforest soilmesh bagsmineral chemistrymineral weatherability

Identifiers

PMID28003192
PMCPMC5311413
OpenAlexW2561698605

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.