Evidence map›Paper›PMID 28002736›Full record

ArticleBiophysical journal2016

A Unique Light-Driven Proton Transportation Signal in Halorhodopsin from Natronomonas pharaonis.

Xiao-Ru Chen, Yuan-Chi Huang, Hsiu-Ping Yi, Chii-Shen Yang

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. KInternational journal of molecular sciences · 2023
    Article
  2. Article
  3. Article
  4. Functional Mechanism of ClAdvances in experimental medicine and biology · 2021
    Review
  5. Unique ClBiophysics and physicobiology · 2021
    Article
  6. Article
  7. Microorganisms · 2020
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Xiao-Ru ChenDepartment of Biochemical Science and Technology, National Taiwan University, Taipei, Taiwan.
Yuan-Chi HuangDepartment of Biochemical Science and Technology, National Taiwan University, Taipei, Taiwan.
Hsiu-Ping YiDepartment of Biochemical Science and Technology, National Taiwan University, Taipei, Taiwan.
Chii-Shen YangDepartment of Biochemical Science and Technology, National Taiwan University, Taipei, Taiwan. Electronic address: chiishen@ntu.edu.tw.
National Taiwan University · TWNational Taipei University of Technology · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Halorhodopsin (HR) is a seven-transmembrane retinylidene protein from haloarchaea that is commonly known to function as a light-driven inward chloride pump. However, previous studies have indicated that despite the general characteristics that most HRs share, HRs from distinct species differ in many aspects. We present indium-tin-oxide-based photocurrent measurements that reveal a light-induced signal generated by proton release that is observed solely in NpHR via purified protein-based assays, demonstrating that indeed HRs are not all identical. We conducted mutagenesis studies on several conserved residues that are considered critical for chloride stability among HRs. Intriguingly, the photocurrent signals were eliminated after specific point mutations. We propose an NpHR light-driven, cytoplasmic-side proton circulation model to explain the unique light-induced photocurrent recorded in NpHR. Notably, the photocurrent and various photocycle intermediates were recorded simultaneously. This approach provides a high-resolution method for further investigations of the proton-assisted chloride translocation mechanism.

Indexed as

LightProtonsChloridesHalobacteriaceaeHalorhodopsinsIon TransportChloridesHalorhodopsinsProtons

Identifiers

PMID28002736
PMCPMC5192691
OpenAlexW2567299158

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.