Evidence map›Paper›PMID 27999619›Full record

ArticleGut pathogens2016

Comparative genomics analyses revealed two virulent

Shu Yong Lim, Kien-Pong Yap, Kwai Lin Thong

Open access · goldAbstract readCase Reports
In one paragraph

Article in Gut pathogens, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Predicting Antibiotic Resistance inInternational journal of molecular sciences · 2025
    Pooled it
  2. Article
  3. Impact of High-Pressure Processing (HPP) onFoods (Basel, Switzerland) · 2023
    Review
  4. Article
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shu Yong LimFaculty of Science, Institute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia.
Kien-Pong YapFaculty of Science, Institute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia.
Kwai Lin ThongFaculty of Science, Institute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia.
University of Malaya · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background

resultsThe genome size of LM115 and LM41 was 2,959,041 and 2,963,111 bp, respectively. These two strains shared approximately 90% homologous genes. Comparative genomics and phylogenomic analyses revealed that LM115 and LM41 were more closely related to the reference strains F2365 and EGD-e, respectively. Our virulence profiling indicated a total of 31 virulence genes shared by both analysed strains. These shared genes included those that encode for internalins and

conclusionsWhole genome sequencing and comparative genomics analyses revealed two virulent

Indexed as

Comparative genomicsLIPI-1Listeria monocytogenesMultidrug resistantReady-to-eat food

Identifiers

PMID27999619
PMCPMC5153821
OpenAlexW2567138208

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.