Evidence map›Paper›PMID 27998292›Full record

ArticleMalaria journal2016

Genetic evidence that the Makira region in northeastern Madagascar is a hotspot of malaria transmission.

Benjamin L Rice, Christopher D Golden, Evelin Jean Gasta Anjaranirina, Carolina Mastella Botelho, Sarah K Volkman, Daniel L Hartl

Abstract read
In one paragraph

Article in Malaria journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. BMJ open · 2024
    Observational
  3. Article
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  9. Review
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  11. Toward an integrative molecular approach to wildlife disease.Conservation biology : the journal of the Society for Conservation Biology · 2018
    Article
  12. Insights into the Performance of SD Bioline Malaria Ag P.f/Pan Rapid Diagnostic Test andThe American journal of tropical medicine and hygiene · 2018
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Benjamin L RiceDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA. benjaminrice@fas.harvard.edu.
Christopher D GoldenDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Evelin Jean Gasta AnjaranirinaMadagascar Health and Environmental Research (MAHERY), Maroantsetra, Madagascar.
Carolina Mastella BotelhoDepartment of Pharmacy and Nutrition, Federal University of Espirito Santo, Alegre, ES, Brazil.
Sarah K VolkmanDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Daniel L HartlDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.

Funding

Novel Genetic Mechanism of Artemisinin Resistance for MalariaR01AI099105 · NIAID · HARVARD SCHOOL OF PUBLIC HEALTH · PI HARTL, DANIEL L, WIRTH, DYANN F · 2013 to 2021
$5.4M
Evolutionary medicine in the development of antimalaria drugsR01AI106734 · NIAID · HARVARD UNIVERSITY · PI HARTL, DANIEL L · 2014 to 2017
$1.6M
NIAID NIH HHS R01 AI099105NIAID NIH HHS R01 AI106734
6 · The paper itself

Abstract

backgroundEncouraging advances in the control of Plasmodium falciparum malaria have been observed across much of Africa in the past decade. However, regions of high relative prevalence and transmission that remain unaddressed or unrecognized provide a threat to this progress. Difficulties in identifying such localized hotspots include inadequate surveillance, especially in remote regions, and the cost and labor needed to produce direct estimates of transmission. Genetic data can provide a much-needed alternative to such empirical estimates, as the pattern of genetic variation within malaria parasite populations is indicative of the level of local transmission. Here, genetic data were used to provide the first empirical estimates of P. falciparum malaria prevalence and transmission dynamics for the rural, remote Makira region of northeastern Madagascar.

methodsLongitudinal surveys of a cohort of 698 total individuals (both sexes, 0-74 years of age) were performed in two communities bordering the Makira Natural Park protected area. Rapid diagnostic tests, with confirmation by molecular methods, were used to estimate P. falciparum prevalence at three seasonal time points separated by 4-month intervals. Genomic loci in a panel of polymorphic, putatively neutral markers were genotyped for 94 P. falciparum infections and used to characterize genetic parameters known to correlate with transmission levels.

resultsOverall, 27.8% of individuals tested positive for P. falciparum over the 10-month course of the study, a rate approximately sevenfold higher than the countrywide average for Madagascar. Among those P. falciparum infections, a high level of genotypic diversity and a high frequency of polygenomic infections (68.1%) were observed, providing a pattern consistent with high and stable transmission.

conclusionsPrevalence and genetic diversity data indicate that the Makira region is a hotspot of P. falciparum transmission in Madagascar. This suggests that the area should be highlighted for future interventions and that additional areas of high transmission may be present in ecologically similar regions nearby.

Indexed as

Disease Transmission, InfectiousGenetic VariationAdolescentAdultAgedChildChild, PreschoolFemaleGenotypeGenotyping TechniquesHumansInfantInfant, NewbornLongitudinal StudiesMadagascarMalaria, FalciparumGenetic diversityGenetic surveillanceMadagascarPlasmodium falciparumPolygenomic infections

Identifiers

PMID27998292
PMCPMC5175380

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.