Evidence map›Paper›PMID 27997767›Full record

ArticleMolecular plant pathology2018

Characterization of silencing suppressor p24 of Grapevine leafroll-associated virus 2.

Mingjun Li, Jiao Zhang, Ming Feng, Xianyou Wang, Chen Luo, Qi Wang, Yuqin Cheng

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

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  16. p24Viruses · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Mingjun LiDepartment of Pomology/Laboratory of Stress Physiology and Molecular Biology for Tree Fruits, a Key Laboratory of Beijing Municipality, China Agricultural University, Beijing, 100193, China.
Jiao ZhangDepartment of Pomology/Laboratory of Stress Physiology and Molecular Biology for Tree Fruits, a Key Laboratory of Beijing Municipality, China Agricultural University, Beijing, 100193, China.
Ming FengDepartment of Pomology/Laboratory of Stress Physiology and Molecular Biology for Tree Fruits, a Key Laboratory of Beijing Municipality, China Agricultural University, Beijing, 100193, China.
Xianyou WangDepartment of Pomology/Laboratory of Stress Physiology and Molecular Biology for Tree Fruits, a Key Laboratory of Beijing Municipality, China Agricultural University, Beijing, 100193, China.
Chen LuoDepartment of Pomology/Laboratory of Stress Physiology and Molecular Biology for Tree Fruits, a Key Laboratory of Beijing Municipality, China Agricultural University, Beijing, 100193, China.
Qi WangDepartment of Plant Pathology, China Agricultural University, Beijing, 100193, China.
Yuqin ChengDepartment of Pomology/Laboratory of Stress Physiology and Molecular Biology for Tree Fruits, a Key Laboratory of Beijing Municipality, China Agricultural University, Beijing, 100193, China.
China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Grapevine leafroll-associated virus 2 (GLRaV-2) p24 has been reported to be an RNA silencing suppressor (RSS). However, the mechanisms underlying p24's suppression of RNA silencing are unknown. Using Agrobacterium infiltration-mediated RNA silencing assays, we showed that GLRaV-2 p24 is a strong RSS triggered by positive-sense green fluorescent protein (GFP) RNA, and that silencing suppression by p24 effectively blocks the accumulation of small interfering RNAs. Deletion analyses showed that the region of amino acids 1-188, which contains all predicted α-helices and β-strands, is required for the RSS activity of p24. Hydrophobic residues I35/F38/V85/V89/W149 and V162/L169/L170, previously shown to be critical for p24 self-interaction, are also crucial for silencing suppression, and western blotting results suggested that a lack of self-interaction ability results in decreased p24 accumulation in plants. The mutants showed greatly weakened or a lack of RSS activity. Substitution with two basic residues at positions 2 or 86, putatively involved in RNA binding, totally abolished the RSS activity of p24, suggesting that p24 uses an RNA-binding strategy to suppress RNA silencing. Our results also showed that W54 in the WG/GW-like motif (W54/G55) is crucial for the RSS activity of p24, whereas p24 does not physically interact with AGO1 of Nicotiana benthamiana. Furthermore, p24 did not promote AGO1 degradation, but significantly up-regulated AGO1 mRNA expression, and this effect was correlated with the RSS activity of p24, indicating that p24 may interfere with microRNA-directed processes. The presented results contribute to our understanding of viral suppression of RNA silencing and the molecular mechanisms underlying GLRaV-2 infection.

Indexed as

Argonaute ProteinsClosterovirusNicotianaPlant DiseasesPlants, Genetically ModifiedRNA, Small InterferingArgonaute ProteinsRNA, Small Interferingargonaute proteinGrapevine leafroll-associated virus 2p24RNA silencing suppressorself-interaction

Identifiers

PMID27997767
PMCPMC6638178
OpenAlexW2566408497

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.