Evidence map›Paper›PMID 27997583›Full record

ArticlePloS one2016

Rapid Generation of Marker-Free P. falciparum Fluorescent Reporter Lines Using Modified CRISPR/Cas9 Constructs and Selection Protocol.

Catherin Marin Mogollon, Fiona J A van Pul, Takashi Imai, Jai Ramesar, Séverine Chevalley-Maurel, Guido M de Roo, Sabrina A J Veld, Hans Kroeze, Blandine M D Franke-Fayard, Chris J Janse and 1 more

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

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  12. Malaria parasite evades mosquito immunity by glutaminyl cyclase-mediated posttranslational protein modification.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Efficient generation of mNeonGreenFrontiers in cellular and infection microbiology · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Generation of NovelFrontiers in cellular and infection microbiology · 2020
    Article
  20. Generation of a Genetically Modified ChimericFrontiers in cellular and infection microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Catherin Marin MogollonLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Fiona J A van PulLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Takashi ImaiLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Jai RamesarLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Séverine Chevalley-MaurelLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Guido M de RooDepartment of Hematology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Sabrina A J VeldDepartment of Hematology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Hans KroezeLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Blandine M D Franke-FayardLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Chris J JanseLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Shahid M KhanLeiden Malaria Research Group, Department of Parasitology, Leiden University Medical Center (LUMC), Leiden, The Netherlands.ORCID http://orcid.org/0000-0002-0533-4670

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CRISPR/Cas9 system is a powerful genome editing technique employed in a wide variety of organisms including recently the human malaria parasite, P. falciparum. Here we report on further improvements to the CRISPR/Cas9 transfection constructs and selection protocol to more rapidly modify the P. falciparum genome and to introduce transgenes into the parasite genome without the inclusion of drug-selectable marker genes. This method was used to stably integrate the gene encoding GFP into the P. falciparum genome under the control of promoters of three different Plasmodium genes (calmodulin, gapdh and hsp70). These genes were selected as they are highly transcribed in blood stages. We show that the three reporter parasite lines generated in this study (GFP@cam, GFP@gapdh and GFP@hsp70) have in vitro blood stage growth kinetics and drug-sensitivity profiles comparable to the parental P. falciparum (NF54) wild-type line. Both asexual and sexual blood stages of the three reporter lines expressed GFP-fluorescence with GFP@hsp70 having the highest fluorescent intensity in schizont stages as shown by flow cytometry analysis of GFP-fluorescence intensity. The improved CRISPR/Cas9 constructs/protocol will aid in the rapid generation of transgenic and modified P. falciparum parasites, including those expressing different reporters proteins under different (stage specific) promoters.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsGene EditingGenome, ProtozoanAntimalarialsDrug ResistanceHeterocyclic Compounds, 4 or More RingsHumansIsoquinolinesMalaria, FalciparumMutationPlasmodium falciparumAntimalarialsHeterocyclic Compounds, 4 or More RingsIsoquinolinesSJ733

Identifiers

PMID27997583
PMCPMC5172577

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.