Evidence map›Paper›PMID 27996044›Full record

ArticleScientific reports2016

Translational regulation of APOBEC3G mRNA by Vif requires its 5'UTR and contributes to restoring HIV-1 infectivity.

Santiago Guerrero, Camille Libre, Julien Batisse, Gaëlle Mercenne, Delphine Richer, Géraldine Laumond, Thomas Decoville, Christiane Moog, Roland Marquet, Jean-Christophe Paillart

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

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  13. Structural Determinants of the APOBEC3G N-Terminal Domain for HIV-1 RNA Association.Frontiers in cellular and infection microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Santiago GuerreroUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, IBMC-15 rue René Descartes, F-67000, Strasbourg, France.
Camille LibreUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, IBMC-15 rue René Descartes, F-67000, Strasbourg, France.
Julien BatisseUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, IBMC-15 rue René Descartes, F-67000, Strasbourg, France.
Gaëlle MercenneUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, IBMC-15 rue René Descartes, F-67000, Strasbourg, France.
Delphine RicherUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, IBMC-15 rue René Descartes, F-67000, Strasbourg, France.
Géraldine LaumondUniversité de Strasbourg, INSERM, UMR 1109, Laboratoire d'ImmunoRhumatologie Moléculaire, Fédération de Médecine Translationnelle de Strasbourg (FMTS), Institut de Virologie, 3 rue Koeberlé, F-67000 Strasbourg, France.
Thomas DecovilleUniversité de Strasbourg, INSERM, UMR 1109, Laboratoire d'ImmunoRhumatologie Moléculaire, Fédération de Médecine Translationnelle de Strasbourg (FMTS), Institut de Virologie, 3 rue Koeberlé, F-67000 Strasbourg, France.
Christiane MoogUniversité de Strasbourg, INSERM, UMR 1109, Laboratoire d'ImmunoRhumatologie Moléculaire, Fédération de Médecine Translationnelle de Strasbourg (FMTS), Institut de Virologie, 3 rue Koeberlé, F-67000 Strasbourg, France.
Roland MarquetUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, IBMC-15 rue René Descartes, F-67000, Strasbourg, France.
Jean-Christophe PaillartUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, IBMC-15 rue René Descartes, F-67000, Strasbourg, France.
Architecture et Réactivité de l'arN · FRInstitut de Biologie Moléculaire et Cellulaire · FRAménagement, Développement, Environnement, Santé et Sociétés · FRImmuno-Rhumathologie moléculaireUniversité de Strasbourg · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The essential HIV-1 viral infectivity factor (Vif) allows productive infection of non-permissive cells expressing cytidine deaminases APOBEC3G (A3G) and A3F by decreasing their cellular level, and preventing their incorporation into virions. Unlike the Vif-induced degradation of A3G, the functional role of the inhibition of A3G translation by Vif remained unclear. Here, we show that two stem-loop structures within the 5'-untranslated region of A3G mRNA are crucial for translation inhibition by Vif in cells, and most Vif alleles neutralize A3G translation efficiently. Interestingly, K26R mutation in Vif abolishes degradation of A3G by the proteasome but has no effect at the translational level, indicating these two pathways are independent. These two mechanisms, proteasomal degradation and translational inhibition, similarly contribute to decrease the cellular level of A3G by Vif and to prevent its incorporation into virions. Importantly, inhibition of A3G translation is sufficient to partially restore viral infectivity in the absence of proteosomal degradation. These findings demonstrate that HIV-1 has evolved redundant mechanisms to specifically inhibit the potent antiviral activity of A3G.

Indexed as

Gene Expression Regulation, Viral5' Untranslated RegionsAllelesAntiviral AgentsAPOBEC-3G DeaminaseCytosine DeaminaseHEK293 CellsHIV InfectionsHumansMutationProteasome Endopeptidase ComplexProtein Processing, Post-TranslationalRNA, Messengervif Gene Products, Human Immunodeficiency Virus5' Untranslated RegionsAntiviral AgentsAPOBEC3F protein, humanAPOBEC-3G DeaminaseAPOBEC3G protein, humanCytosine DeaminaseProteasome Endopeptidase ComplexRNA, Messengervif Gene Products, Human Immunodeficiency Virusvif protein, Human immunodeficiency virus 1

Identifiers

PMID27996044
PMCPMC5171582
OpenAlexW2562005633

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.