Evidence map›Paper›PMID 27994980›Full record

ArticlePeerJ2016

Next-generation sequencing of mixed genomic DNA allows efficient assembly of rearranged mitochondrial genomes in

Siqi Yuan, Yun Xia, Yuchi Zheng, Xiaomao Zeng

Abstract read
In one paragraph

Article in PeerJ, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2025
    Article
  4. Article
  5. The Complete Mitogenome ofAnimals : an open access journal from MDPI · 2022
    Article
  6. Article
  7. The complete mitochondrial genome of the forest crested lizard,Mitochondrial DNA. Part B, Resources · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Characterization of complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2020
    Article
  12. The mitochondrial genome of broad-folded frog (Mitochondrial DNA. Part B, Resources · 2019
    Article
  13. The complete mitogenome of the granular torrent frog,Mitochondrial DNA. Part B, Resources · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Siqi YuanDepartment of Herpetology, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, Sichuan, China; University of Chinese Academy of Sciences, Beijing, China.
Yun XiaDepartment of Herpetology, Chengdu Institute of Biology, Chinese Academy of Sciences , Chengdu , Sichuan , China.
Yuchi ZhengDepartment of Herpetology, Chengdu Institute of Biology, Chinese Academy of Sciences , Chengdu , Sichuan , China.
Xiaomao ZengDepartment of Herpetology, Chengdu Institute of Biology, Chinese Academy of Sciences , Chengdu , Sichuan , China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent improvements in next-generation sequencing (NGS) technologies can facilitate the obtainment of mitochondrial genomes. However, it is not clear whether NGS could be effectively used to reconstruct the mitogenome with high gene rearrangement. These high rearrangements would cause amplification failure, and/or assembly and alignment errors. Here, we choose two frogs with rearranged gene order,

Indexed as

Gene rearrangementIllumina sequencingMitogenomeNeobatrachianWANCY

Identifiers

PMID27994980
PMCPMC5162401

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.