Evidence map›Paper›PMID 27994069›Full record

ArticleThe Journal of experimental medicine2017

Intrinsic transcriptional heterogeneity in B cells controls early class switching to IgE.

Yee Ling Wu, Michael J T Stubbington, Maria Daly, Sarah A Teichmann, Cristina Rada

Open access · hybridAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
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  10. Single-cell profiling of African swine fever virus disease in the pig spleen reveals viral and host dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Comparison of Non B-Ig and B-Ig.Advances in experimental medicine and biology · 2024
    Review
  12. Article
  13. Progress in Discovering Transcriptional Noise in Aging.International journal of molecular sciences · 2023
    Review
  14. B cells defined by immunoglobulin isotypes.Clinical and experimental immunology · 2022
    Article
  15. Induction of natural IgE by glucocorticoids.The Journal of experimental medicine · 2022
    Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yee Ling WuMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, England, UK.
Michael J T StubbingtonThe Wellcome Trust Sanger Institute, Cambridge CB10 1SA, England, UK.ORCID 0000-0001-5924-3566
Maria DalyMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, England, UK.ORCID 0000-0001-8142-3053
Sarah A TeichmannThe Wellcome Trust Sanger Institute, Cambridge CB10 1SA, England, UK.
Cristina RadaMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, England, UK car@mrc-lmb.cam.ac.uk.ORCID 0000-0003-4898-5550
MRC Laboratory of Molecular Biology · GBWellcome Sanger Institute · GB

Funding

Studies of Antibody Diversity and Genome Stability: Regulation of Activation-InduF32AI091311 · NIAID · MEDICAL RES COUNCIL LAB OF MOLEC BIOL · PI WU, YEE LING · 2010 to 2013
$153k
European Research Council 260507Medical Research Council MC_U105178805Medical Research Council MC_U105178806NIAID NIH HHS F32 AI091311
6 · The paper itself

Abstract

Noncoding transcripts originating upstream of the immunoglobulin constant region (I transcripts) are required to direct activation-induced deaminase to initiate class switching in B cells. Differential regulation of Iε and Iγ1 transcription in response to interleukin 4 (IL-4), hence class switching to IgE and IgG1, is not fully understood. In this study, we combine novel mouse reporters and single-cell RNA sequencing to reveal the heterogeneity in IL-4-induced I transcription. We identify an early population of cells expressing Iε but not Iγ1 and demonstrate that early Iε transcription leads to switching to IgE and occurs at lower activation levels than Iγ1. Our results reveal how probabilistic transcription with a lower activation threshold for Iε directs the early choice of IgE versus IgG1, a key physiological response against parasitic infestations and a mediator of allergy and asthma.

Indexed as

Immunoglobulin Class SwitchingTranscription, GeneticAICDA (Activation-Induced Cytidine Deaminase)AnimalsB-LymphocytesCytidine DeaminaseImmunoglobulin EInterleukin-4MiceMice, Inbred BALB CPromoter Regions, GeneticAICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseImmunoglobulin EInterleukin-4

Identifiers

PMID27994069
PMCPMC5206502
OpenAlexW2561180060

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.