Evidence map›Paper›PMID 27994041›Full record

ArticleMolecular systems biology2016

Non-genetic diversity modulates population performance.

Adam James Waite, Nicholas W Frankel, Yann S Dufour, Jessica F Johnston, Junjiajia Long, Thierry Emonet

Erratum issuedAbstract read
In one paragraph

Article in Molecular systems biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

  1. Article
  2. Growth-dependent sensory bet-hedging enhances collective navigation.bioRxiv : the preprint server for biology · 2026
    Article
  3. The dynamic response of the bacterial flagellar motor to its direct intracellular input signal.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Nature physics · 2026
    Article
  5. ChemotaxingArXiv · 2025
    Article
  6. ChemotaxingbioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Coarse-graining bacterial diffusion in disordered media to surface states.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Nongenetic adaptation by collective migration.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Trajectory analysis ofBiomicrofluidics · 2024
    Article
  11. Article
  12. Direct measurement of dynamic attractant gradients reveals breakdown of the Patlak-Keller-Segel chemotaxis model.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. The ecological roles of bacterial chemotaxis.Nature reviews. Microbiology · 2022
    Review
  15. Collective behavior and nongenetic inheritance allow bacterial populations to adapt to changing environments.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Adam James WaiteDepartment of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-3537-7313
Nicholas W FrankelDepartment of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, USA.
Yann S DufourDepartment of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-0244-0192
Jessica F JohnstonDepartment of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-6696-7909
Junjiajia LongDepartment of Physics, Yale University, New Haven, CT, USA.
Thierry EmonetDepartment of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, USA thierry.emonet@yale.edu.ORCID http://orcid.org/0000-0002-6746-6564

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
The contribution of phenotypic variability to chemotactic performanceR01GM106189 · NIGMS · YALE UNIVERSITY · PI EMONET, THIERRY · 2013 to 2022
$2.6M
NIGMS NIH HHS R01 GM106189NIGMS NIH HHS T32 GM007223
6 · The paper itself

Abstract

Biological functions are typically performed by groups of cells that express predominantly the same genes, yet display a continuum of phenotypes. While it is known how one genotype can generate such non-genetic diversity, it remains unclear how different phenotypes contribute to the performance of biological function at the population level. We developed a microfluidic device to simultaneously measure the phenotype and chemotactic performance of tens of thousands of individual, freely swimming Escherichia coli as they climbed a gradient of attractant. We discovered that spatial structure spontaneously emerged from initially well-mixed wild-type populations due to non-genetic diversity. By manipulating the expression of key chemotaxis proteins, we established a causal relationship between protein expression, non-genetic diversity, and performance that was theoretically predicted. This approach generated a complete phenotype-to-performance map, in which we found a nonlinear regime. We used this map to demonstrate how changing the shape of a phenotypic distribution can have as large of an effect on collective performance as changing the mean phenotype, suggesting that selection could act on both during the process of adaptation.

Indexed as

ChemotaxisAdaptation, PhysiologicalEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialMicrofluidic Analytical TechniquesModels, BiologicalPhenotypeEscherichia coli Proteinscellular motilitychemotaxisJensen's inequalitynon‐genetic diversitynonlinear systems

Identifiers

PMID27994041
PMCPMC5199129

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.