Evidence map›Paper›PMID 27992956›Full record

ArticleCancer science2017

Degree of methylation burden is determined by the exposure period to carcinogenic factors.

Hideyuki Takeshima, Tohru Niwa, Takeshi Toyoda, Mika Wakabayashi, Satoshi Yamashita, Toshikazu Ushijima

Open access · goldAbstract read
In one paragraph

Article in Cancer science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. DNA Methylation Analysis.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  3. Cells · 2022
    Article
  4. Journal of Cancer · 2021
    Article
  5. Article
  6. Review
  7. Article
  8. Novel epigenetic markers for gastric cancer risk stratification in individuals after Helicobacter pylori eradication.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2018
    Article
  9. Genetic and epigenetic alterations in normal tissues have differential impacts on cancer risk among tissues.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hideyuki TakeshimaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Tohru NiwaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Takeshi ToyodaDivision of Pathology, National Institute of Health Sciences, Tokyo, Japan.
Mika WakabayashiDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Satoshi YamashitaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Toshikazu UshijimaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
National Institute of Health Sciences · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aberrant DNA methylation accumulated in normal tissues, namely methylation burden, is associated with risk of carcinogenesis. The levels of methylation burden are known to be influenced by multiple factors, such as genetic factors and strengths of carcinogenic factors. However, the impact of the degree of exposure to a carcinogenic factor is still unclear. Here, using a Mongolian gerbil model of Helicobacter pylori (H. pylori)-induced gastritis, we aimed to clarify the impact of the degree of exposure on methylation burden in normal gastric tissues. DNA methylation levels of four CpG islands, HE6, SA9, SB5, and SD2, increased by H. pylori infection, depending upon the infection period. After eradication of H. pylori, DNA methylation levels decreased, but tended to be higher in gastric mucosae with a longer infection period. DNA molecules with dense methylation, but not those with sparse methylation, increased depending upon the infection period. DNA methylation levels of one of the four CpG islands, SA9, tended to be higher in gastric mucosae of gerbils infected with H. pylori, even 50 weeks after eradication than in those of non-infected gerbils. These results showed for the first time that the levels of methylation burden in normal tissues are influenced by the degree of exposure to a carcinogenic factor.

Indexed as

AnimalsCarcinogenesisCarcinogensCpG IslandsDisease Models, AnimalDNA MethylationGastric MucosaGastritisGerbillinaeHelicobacter InfectionsHelicobacter pyloriCarcinogensAberrant DNA methylationcarcinogenic factorchronic inflammationeradicationmethylation burden

Identifiers

PMID27992956
PMCPMC5378290
OpenAlexW2566855257

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.