Evidence map›Paper›PMID 27988887›Full record

ArticlePlanta2017

AhDGR2, an amaranth abiotic stress-induced DUF642 protein gene, modifies cell wall structure and composition and causes salt and ABA hyper-sensibility in transgenic Arabidopsis.

Paola A Palmeros-Suárez, Julio A Massange-Sánchez, Lino Sánchez-Segura, Norma A Martínez-Gallardo, Eduardo Espitia Rangel, Juan F Gómez-Leyva, John P Délano-Frier

Abstract read
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In one paragraph

Article in Planta, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
7.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 101 citations in OpenAlex.

  1. Article
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  4. Plants (Basel, Switzerland) · 2025
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  10. Review
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  13. Review
  14. Article
  15. Overexpression of a DUF740 family gene (Frontiers in plant science · 2022
    Article
  16. Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Paola A Palmeros-SuárezLaboratorio de Biología Molecular, Instituto Tecnológico de Tlajomulco, Jalisco, km 10 Carretera a San Miguel Cuyutlán, CP 45640, Tlajomulco de Zúñiga, Jalisco, Mexico.
Julio A Massange-SánchezBiotechnology and Biochemistry Department, Centro de Investigación y de Estudios Avanzados del I. P. N., Unidad Irapuato, Km 9.6 del Libramiento Norte Carretera Irapuato-León, CP 36821, Irapuato, GTO., Mexico.
Lino Sánchez-SeguraBiotechnology and Biochemistry Department, Centro de Investigación y de Estudios Avanzados del I. P. N., Unidad Irapuato, Km 9.6 del Libramiento Norte Carretera Irapuato-León, CP 36821, Irapuato, GTO., Mexico.
Norma A Martínez-GallardoBiotechnology and Biochemistry Department, Centro de Investigación y de Estudios Avanzados del I. P. N., Unidad Irapuato, Km 9.6 del Libramiento Norte Carretera Irapuato-León, CP 36821, Irapuato, GTO., Mexico.
Eduardo Espitia RangelInstituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias, Km 13.5 Carrretera Los Reyes-Texcoco, CP 56250, Coatlinchán Texcoco, Estado de México, Mexico.
Juan F Gómez-LeyvaLaboratorio de Biología Molecular, Instituto Tecnológico de Tlajomulco, Jalisco, km 10 Carretera a San Miguel Cuyutlán, CP 45640, Tlajomulco de Zúñiga, Jalisco, Mexico.
John P Délano-FrierBiotechnology and Biochemistry Department, Centro de Investigación y de Estudios Avanzados del I. P. N., Unidad Irapuato, Km 9.6 del Libramiento Norte Carretera Irapuato-León, CP 36821, Irapuato, GTO., Mexico. jdelano@ira.cinvestav.mx.
Instituto Tecnológico Superior de Irapuato · MXInstituto Nacional de Investigaciones Forestales Agrícolas y Pecuarias · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionAn amaranth DGR gene, induced under abiotic stress, modifies cell wall structure and causes hypersensitivity to ABA and salt when overexpressed in Arabidopsis. DUF642 is a highly conserved plant-specific family of unknown cell wall-associated proteins. The AhDGR2 gene, coding for a DUF642 protein, was significantly induced in grain amaranth (Amaranthus hypochondriacus) plants subjected to water-deficit and salinity stress, thereby suggesting its participation in abiotic stress tolerance in this plant. A role in development was also inferred from the higher AhDGR2 expression rates detected in young tissues. Subsequent overexpression of AhDGR2 in transgenic Arabidopsis plants (OE-AhDGR2) supported its possible role in development processes. Thus, OE-AhDGR2 plants generated significantly longer roots when grown in normal MS medium. However, they showed a hypersensitivity to increasing concentrations of abscisic acid or NaCl in the medium, as manifested by shorter root length, smaller and slightly chlorotic rosettes, as well as highly reduced germination rates. Contrary to expectations, OE-AhDGR2 plants were intolerant to abiotic stress. Moreover, cell walls in transgenic plants were thinner, in leaves, and more disorganized, in roots, and had significantly modified pectin levels. Lower pectin methylesterase activity detected in leaves of OE-AhDGR2 plants, but not in roots, was contrary to previous reports associating DUF642 proteins and decreased pectin esterification levels in cell walls. Nonetheless, microarray data identified candidate genes whose expression levels explained the phenotypes observed in leaves of OE-AhDGR2 plants, including several involved in cell wall integrity and extension, growth and development, and resistance to abiotic stress. These results support the role of DUF642 proteins in cell wall-related processes and offer novel insights into their possible role(s) in plants.

Indexed as

Abscisic AcidAmaranthaceaeArabidopsisCell WallDown-RegulationGene Expression Regulation, PlantGenes, PlantOligonucleotide Array Sequence AnalysisPhylogenyPlant LeavesPlant ProteinsPlant RootsPlants, Genetically ModifiedSeedsSequence Analysis, DNASodium ChlorideAbscisic AcidPlant ProteinsSodium ChlorideAbiotic stressAbscisic acidCell wallDUF642DUF642 L-GalL-responsive geneGrain amaranthPectinPectin methylesterase

Identifiers

PMID27988887
OpenAlexW2563409875

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.