Evidence map›Paper›PMID 27986717›Full record

ArticleApplied and environmental microbiology2017

FlrA Represses Transcription of the Biofilm-Associated bpfA Operon in Shewanella putrefaciens.

Yuan-Yuan Cheng, Chao Wu, Jia-Yi Wu, Hui-Ling Jia, Ming-Yu Wang, Huan-Yu Wang, Si-Min Zou, Rui-Rui Sun, Rong Jia, Ya-Zhong Xiao

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

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  5. Genomic Analysis of Two Representative Strains ofFoods (Basel, Switzerland) · 2022
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  9. Article
  10. Biofilm Biology and Engineering ofFrontiers in bioengineering and biotechnology · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Mechanism and Role of Globin-Coupled Sensor Signalling.Advances in microbial physiology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yuan-Yuan ChengSchool of Life Sciences, Anhui University, Hefei, China chengyy@ahu.edu.cn.
Chao WuSchool of Resources and Environment, Anhui University, Hefei, China.
Jia-Yi WuSchool of Life Sciences, Anhui University, Hefei, China.
Hui-Ling JiaSchool of Life Sciences, Anhui University, Hefei, China.
Ming-Yu WangAnhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, Anhui University, Hefei, China.
Huan-Yu WangSchool of Life Sciences, Anhui University, Hefei, China.
Si-Min ZouSchool of Life Sciences, Anhui University, Hefei, China.
Rui-Rui SunSchool of Life Sciences, Anhui University, Hefei, China.
Rong JiaSchool of Life Sciences, Anhui University, Hefei, China.
Ya-Zhong XiaoSchool of Life Sciences, Anhui University, Hefei, China.
Anhui University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Manipulation of biofilm formation in Shewanella is beneficial for application to industrial and environmental biotechnology. BpfA is an adhesin largely responsible for biofilm formation in many Shewanella species. However, the mechanism underlying BpfA production and the resulting biofilm remains vaguely understood. We previously described the finding that BpfA expression is enhanced by DosD, an oxygen-stimulated diguanylate cyclase, under aerobic growth. In the present work, we identify FlrA as a critical transcription regulator of the bpfA operon in Shewanella putrefaciens CN32 by transposon mutagenesis. FlrA acted as a repressor of the operon promoter by binding to two boxes overlapping the -10 and -35 sites recognized by σ IMPORTANCE: Motility and biofilm are mutually exclusive lifestyles, shifts between which are under the strict regulation of bacteria attempting to adapt to the fluctuation of diverse environmental conditions. The FlrA protein in many bacteria is known to control motility as a master regulator of flagellum synthesis. This work elucidates its effect on biofilm formation by controlling the expression of the adhesin BpfA in S. putrefaciens CN32 in response to c-di-GMP. Therefore, FlrA plays a dual role in controlling motility and biofilm formation in S. putrefaciens CN32. The cooccurrence of flrA, bpfA, and the FlrA box in the promoter region of the bpfA operon in diverse Shewanella strains suggests that bpfA is a common mechanism that controls biofilm formation in this bacterial species.

Indexed as

Adhesins, BacterialBacterial ProteinsBase SequenceBiofilmsCyclic GMPFlagellaGene Expression Regulation, BacterialPromoter Regions, GeneticRepressor ProteinsShewanella putrefaciensTranscription, GeneticAdhesins, BacterialBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPRepressor Proteinsbiofilmcyclic di-GMPFlrAShewanellatranscriptional factor

Identifiers

PMID27986717
PMCPMC5288817
OpenAlexW2563904620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.