Evidence map›Paper›PMID 27986455›Full record

ArticleImmunity2017

Human Innate Lymphoid Cell Subsets Possess Tissue-Type Based Heterogeneity in Phenotype and Frequency.

Yannick Simoni, Michael Fehlings, Henrik N Kløverpris, Naomi McGovern, Si-Lin Koo, Chiew Yee Loh, Shawn Lim, Ayako Kurioka, Joannah R Fergusson, Choong-Leong Tang and 21 more

Erratum issuedAbstract read
In one paragraph

Article in Immunity, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 269 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
269citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

269 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Effects of Air Pollution on Lung Innate Lymphoid Cells: Review of In Vitro and In Vivo Experimental Studies.International journal of environmental research and public health · 2019
    Pooled it
  4. Trial
  5. Persistent cytolytic CD8Cell reports. Medicine · 2026
    Article
  6. Review
  7. ILC2s and their immune checkpoints in the antitumor response.Journal for immunotherapy of cancer · 2026
    Review
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209 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

31 authors.

Yannick SimoniAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore. Electronic address: yannick_simoni@immunol.a-star.edu.sg.
Michael FehlingsAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore.
Henrik N KløverprisAfrica Health Research Institute (AHRI), 4001 Durban, South Africa; Department of Immunology and Microbiology, University of Copenhagen, 1165 Copenhagen, Denmark.
Naomi McGovernAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore.
Si-Lin KooDivision of Medical Oncology, National Cancer Centre Singapore (NCCS), 169610 Singapore.
Chiew Yee LohAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore.
Shawn LimAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore.
Ayako KuriokaPeter Medawar Building for Pathogen Research, University of Oxford, OX1 3SY Oxford, UK.
Joannah R FergussonPeter Medawar Building for Pathogen Research, University of Oxford, OX1 3SY Oxford, UK.
Choong-Leong TangDepartment of Colorectal surgery, Singapore General Hospital, 169856 Singapore.
Ming Hian KamDepartment of Colorectal surgery, Singapore General Hospital, 169856 Singapore.
Koh DennisDepartment of Colorectal surgery, Singapore General Hospital, 169856 Singapore; Colorectal Practice, Mount Elizabeth Medical Centre, 228510 Singapore.
Tony Kiat Hon LimDepartment of Anatomical Pathology, Singapore General Hospital, 169608 Singapore.
Alexander Chung Yaw FuiDepartment of Hepatopancreatobiliary/Transplant Surgery, Singapore General Hospital, 169608 Singapore.
Chan Weng HoongDepartment of Upper GI/Bariatric Surgery, Singapore General Hospital, 169608 Singapore.
Jerry Kok Yen ChanKK Women's and Children's Hospital, Department of Reproductive Medicine, 229899 Singapore; Duke-NUS Graduate Medical School, 169857 Singapore.
Maria Curotto de LafailleAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore; New York University School of Medicine, 10012 New york, USA.
Sriram NarayananAgency for Science, Technology and Research (A(∗)STAR), Institute of Molecular and Cell Biology (IMCB), 138673 Singapore.
Sonia BaigDepartment of Medicine, Yong Loo Lin School of Medicine, National University of Singapore, 119228 Singapore.
Muhammad ShabeerDepartment of Medicine, Yong Loo Lin School of Medicine, National University of Singapore, 119228 Singapore.
Sue-Anne Ee Shiow TohDuke-NUS Graduate Medical School, 169857 Singapore; Department of Medicine, Yong Loo Lin School of Medicine, National University of Singapore, 119228 Singapore; Department of Medicine, National University Health System, 119228 Singapore; Perelman School of Medicine, University of Pennsylvania, 19104 USA.
Henry Kun Kiaang TanKK Women's and Children's Hospital, Department of Otolaryngology, 229899 Singapore.
Rosslyn AniceteKK Women's and Children's Hospital, Department of Otolaryngology, 229899 Singapore.
Eng-Huat TanDivision of Medical Oncology, National Cancer Centre Singapore (NCCS), 169610 Singapore.
Angela TakanoDepartment of Anatomical Pathology, Singapore General Hospital, 169608 Singapore.
Paul KlenermanPeter Medawar Building for Pathogen Research, University of Oxford, OX1 3SY Oxford, UK.
Alasdair LeslieAfrica Health Research Institute (AHRI), 4001 Durban, South Africa.
Daniel S W TanDivision of Medical Oncology, National Cancer Centre Singapore (NCCS), 169610 Singapore; Agency for Science, Technology and Research (A(∗)STAR), Genome Institute of Singapore (GIS), 138672 Singapore.
Iain Beehuat TanDivision of Medical Oncology, National Cancer Centre Singapore (NCCS), 169610 Singapore; Duke-NUS Graduate Medical School, 169857 Singapore; Agency for Science, Technology and Research (A(∗)STAR), Genome Institute of Singapore (GIS), 138672 Singapore.
Florent GinhouxAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore.
Evan W NewellAgency for Science, Technology and Research (A(∗)STAR), Singapore Immunology Network (SIgN), 138648 Singapore. Electronic address: evan_newell@immunol.a-star.edu.sg.

Funding

Department of HealthWellcome Trust 109965Wellcome Trust 109965/Z/15/ZWellcome Trust WT109965MA
6 · The paper itself

Abstract

Animal models have highlighted the importance of innate lymphoid cells (ILCs) in multiple immune responses. However, technical limitations have hampered adequate characterization of ILCs in humans. Here, we used mass cytometry including a broad range of surface markers and transcription factors to accurately identify and profile ILCs across healthy and inflamed tissue types. High dimensional analysis allowed for clear phenotypic delineation of ILC2 and ILC3 subsets. We were not able to detect ILC1 cells in any of the tissues assessed, however, we identified intra-epithelial (ie)ILC1-like cells that represent a broader category of NK cells in mucosal and non-mucosal pathological tissues. In addition, we have revealed the expression of phenotypic molecules that have not been previously described for ILCs. Our analysis shows that human ILCs are highly heterogeneous cell types between individuals and tissues. It also provides a global, comprehensive, and detailed description of ILC heterogeneity in humans across patients and tissues.

Indexed as

Flow CytometryHumansImmunity, InnateLymphocytesLymphocyte SubsetsPhenotypeCyTOFhumanieILC1ILCILC1ILC2ILC3

Identifiers

PMID27986455
PMCPMC7612935

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.