Evidence map›Paper›PMID 27984588›Full record

ArticlePloS one2016

A Data Fusion Approach to Enhance Association Study in Epilepsy.

Simone Marini, Ivan Limongelli, Ettore Rizzo, Alberto Malovini, Edoardo Errichiello, Annalisa Vetro, Tan Da, Orsetta Zuffardi, Riccardo Bellazzi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Applications for Deep Learning in Epilepsy Genetic Research.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Simone MariniBioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0002-5704-3533
Ivan LimongelliGenomic Core Center, IRCCS Fondazione San Matteo, Pavia, Italy.
Ettore RizzoenGenome S.r.l., Via Ferrata 5, Pavia, Italy.
Alberto MaloviniIRCCS Fondazione S. Maugeri, Pavia, Italy.
Edoardo ErrichielloDepartment of Molecular Medicine, University of Pavia, Pavia, Italy.
Annalisa VetroDepartment of Molecular Medicine, University of Pavia, Pavia, Italy.
Tan DaDepartment of Electrical, Computer and Biomedical Engineering, University of Pavia, Pavia, Italy.
Orsetta ZuffardiDepartment of Molecular Medicine, University of Pavia, Pavia, Italy.
Riccardo BellazziDepartment of Electrical, Computer and Biomedical Engineering, University of Pavia, Pavia, Italy.
University of Pavia · ITFondazione Salvatore Maugeri · ITKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among the scientific challenges posed by complex diseases with a strong genetic component, two stand out. One is unveiling the role of rare and common genetic variants; the other is the design of classification models to improve clinical diagnosis and predictive models for prognosis and personalized therapies. In this paper, we present a data fusion framework merging gene, domain, pathway and protein-protein interaction data related to a next generation sequencing epilepsy gene panel. Our method allows integrating association information from multiple genomic sources and aims at highlighting the set of common and rare variants that are capable to trigger the occurrence of a complex disease. When compared to other approaches, our method shows better performances in classifying patients affected by epilepsy.

Indexed as

AlgorithmsComputational BiologyEpilepsyGene Regulatory NetworksGenetic Association StudiesGenetic Predisposition to DiseaseGenetic VariationHigh-Throughput Nucleotide SequencingHumansProtein Interaction Maps

Identifiers

PMID27984588
PMCPMC5161322
OpenAlexW2561879399

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.