Evidence map›Paper›PMID 27983729›Full record

ArticleEye (London, England)2017

Genetic screening in Iranian patients with retinoblastoma.

K Shahraki, A Ahani, P Sharma, M Faranoush, G Bahoush, I Torktaz, W A Gahl, M Naseripour, B Behnam

Open access · bronzeAbstract read
In one paragraph

Article in Eye (London, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Effects of folate-conjugated FeMedical oncology (Northwood, London, England) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

K ShahrakiDepartment of Ophthalmology and Eye Research Center, Rassoul Akram Hospital, Iran University of Medical Sciences (IUMS), Tehran, Iran.
A AhaniReproductive Biotechnology Research Center, Avicenna Research Institute, Tehran, Iran.
P SharmaNIH Undiagnosed Diseases Program, Common Fund, Office of the Clinical Director, NHGRI, National Institutes of Health, Bethesda, MD, USA.
M FaranoushDepartment of Pediatrics, Rassoul Akram Hospital, Iran University of Medical Sciences (IUMS), Tehran, Iran.
G BahoushDepartment of Pediatrics, Ali Asghar Children Hospital, Iran University of Medical Sciences (IUMS), Tehran, Iran.
I TorktazDepartment of Molecular Genetics, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran.
W A GahlNIH Undiagnosed Diseases Program, Common Fund, Office of the Clinical Director, NHGRI, National Institutes of Health, Bethesda, MD, USA.
M NaseripourDepartment of Ophthalmology and Eye Research Center, Rassoul Akram Hospital, Iran University of Medical Sciences (IUMS), Tehran, Iran.
B BehnamNIH Undiagnosed Diseases Program, Common Fund, Office of the Clinical Director, NHGRI, National Institutes of Health, Bethesda, MD, USA.
Iran University of Medical Sciences · IRBiotechnology Research Center · IRNational Human Genome Research Institute · USNational Institute of Genetic Engineering and Biotechnology · IRNational Institutes of Health · USOffice of the Director · USRasool Akram Hospital · IR

Funding

Human Biochemical GeneticsZIAHG000215 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GAHL, WILLIAM · 2009 to 2025
$72.6M
6 · The paper itself

Abstract

PurposeThe most common intraocular tumor in childhood, retinoblastoma, is largely associated with mutations in the RB1 gene. In the most comprehensive RB1 screening in Iran, we evaluated the RB1 mutations in 106 patients with retinoblastoma, including 73 bilateral (heritable) and 33 unilateral (sporadic) cases.Patients and methodsMutations were identified using amplification refractory mutation system (ARMS) PCR and direct sequencing of the 27 coding exons of RB1 and multiplex ligation-dependent probe amplification (MLPA).Results and ConclusionWe found 33 (31%) and 64 (60%) patients with sporadic unilateral and bilateral retinoblastoma, respectively as well as 9 (8.5%) cases with hereditary bilateral retinoblastoma. In total, we identified 52 causative RB1 mutations in 106 patients (global mutation rate of 49%). Of the 52 patients, 48 (92%) had sporadic and familial bilateral and 4 (8%) had sporadic unilateral RB. Therefore, the detection rate of RB1 mutations was 66% (48/73) and 12% (4/33) in bilateral and unilateral cases, respectively. Mutations were classified as nonsense in 31 (60%), missense in 1 (2%), large deletion in 11 (21%), small deletion in the 7 novel (15%) and splice site mutation in 2 (4%) patients with RB. Of 31 nonsense mutations, 23 (74%) occurred in the 11 Arginine codons of the RB1. Seven mutations (13%) were novel, and 45 (87%) had been previously reported. Thirty-three mutations were single-base substitutions leading to 31 nonsense amino acid changes and 2 splice site mutations in introns 12 and 16 of RB1. The altered 3D model structures of the RB1 novel mutant proteins are also predicted in this study.

Indexed as

Genetic TestingAsian PeopleChildChild, PreschoolCodon, NonsenseDNA Mutational AnalysisFemaleGene ExpressionGenetic Predisposition to DiseaseHumansInfantIranMaleMolecular Sequence DataRetinaRetinal NeoplasmsCodon, Nonsense

Identifiers

PMID27983729
PMCPMC5396007
OpenAlexW2565712533

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.