Evidence map›Paper›PMID 27983535›Full record

ArticleCancer biomarkers : section A of Disease markers2017

E2F transcription factors associated with up-regulated genes in glioblastoma.

Flávia S Donaires, Paulo R D V Godoy, Giovana S Leandro, Denis Puthier, Elza T Sakamoto-Hojo

Open access · greenAbstract read
In one paragraph

Article in Cancer biomarkers : section A of Disease markers, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  4. Transcription Factors with Targeting Potential in Gliomas.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Flávia S DonairesDepartment of Genetics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, SP, Brazil.
Paulo R D V GodoyDepartment of Genetics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, SP, Brazil.
Giovana S LeandroDepartment of Genetics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, SP, Brazil.
Denis PuthierTechnological Advances for Genomics and Clinics (TAGC), UMR, S 1090 INSERM Aix-Marseille Université, U928 Parc Scientifique de Luminy Case 928 163, Avenue de Luminy, 13288 Marseille Cedex 9, France.
Elza T Sakamoto-HojoDepartment of Genetics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, SP, Brazil.
Universidade de São Paulo · BRAix-Marseille Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlioblastoma is considered to the most common and malignant brain tumor in adults. Patients have a median survival of approximately one year from diagnosis due to poor response to therapy.

objectiveWe applied bioinformatics approaches to predict transcription factors (TF) that are deregulated in glioblastoma in an attempt to point out molecular targets for therapy.

methodsUp-regulated genes in glioblastoma selected from public microarray data were submitted to two TF association analyses. Thereafter, the expression levels of TF obtained in the overlap of analyses were assessed by RT-qPCR carried out in seven glioblastoma cell lines (T98, U251, U138, U87, U343, M059J, and M059K).

resultsE2F1 and E2F4 were highlighted in both TF analyses. However, only E2F1 was confirmed as significantly up-regulated in all glioblastoma cell lines in vitro.

conclusionE2F1 is a potential common regulator of differentially expressed genes in glioblastoma, despite the genetic heterogeneity of tumor cells.

Indexed as

Cell Line, TumorCentral Nervous System NeoplasmsE2F1 Transcription FactorE2F4 Transcription FactorE2F Transcription FactorsGene Expression Regulation, NeoplasticGlioblastomaHumansOligonucleotide Array Sequence AnalysisUp-RegulationE2F1 protein, humanE2F1 Transcription FactorE2F4 protein, humanE2F4 Transcription FactorE2F Transcription FactorsE2F transcription factorsGlioblastoma

Identifiers

PMID27983535
PMCPMC13020583
OpenAlexW2565755739

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.