Evidence map›Paper›PMID 27981029›Full record

ArticleNeuroImage. Clinical2017

Automated white matter fiber tract identification in patients with brain tumors.

Lauren J O'Donnell, Yannick Suter, Laura Rigolo, Pegah Kahali, Fan Zhang, Isaiah Norton, Angela Albi, Olutayo Olubiyi, Antonio Meola, Walid I Essayed and 6 more

Open access · goldAbstract read
In one paragraph

Article in NeuroImage. Clinical, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed, 1 pooled it
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 1 synthesis or guideline pooled it, 130 citations in OpenAlex.

  1. Pooled it
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  7. Review
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  15. Multimodal Neuroimaging Computing: Basics and Applications in Neurosurgery.Advances in experimental medicine and biology · 2024
    Review
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  20. The decoupling of structural and functional connectivity of auditory networks in individuals at clinical high-risk for psychosis.The world journal of biological psychiatry : the official journal of the World Federation of Societies of Biological Psychiatry · 2023
    Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 4 countries.

Lauren J O'DonnellBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Yannick SuterBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA; Institute for Surgical Technology and Biomechanics, University of Bern, Switzerland.
Laura RigoloBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Pegah KahaliBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Fan ZhangBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Isaiah NortonBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Angela AlbiBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA; Center for Mind/Brain Sciences (CIMEC), University of Trento, Rovereto, Italy.
Olutayo OlubiyiBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Antonio MeolaBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Walid I EssayedBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Prashin UnadkatBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Pelin Aksit CirisBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA; Department of Biomedical Engineering, Akdeniz University, Antalya, Turkey.
William M WellsBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Yogesh RathiBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Carl-Fredrik WestinBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Alexandra J GolbyBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Brigham and Women's Hospital · USUniversity of Bern · CH

Funding

Mapping the Human Connectome: Structure, Function, and HeritabilityU54MH091657 · NIMH · WASHINGTON UNIVERSITY · PI UGURBIL, KAMIL, VAN ESSEN, DAVID C · 2010 to 2014
$34.7M
Training and DisseminationP41EB015902 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI PUJOL, SONIA · 2012 to 2022
$20.9M
Image Guided Therapy Center - Ultrasound-based sensor system for the monitoring of COVID-19 patientsP41EB015898 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI TEMPANY, CLARE M · 2012 to 2021
$18.9M
Novel DT-MRI Analyses of White Matter in SchizophreniaR01MH074794 · NIMH · BRIGHAM AND WOMEN'S HOSPITAL · PI WESTIN, CARL-FREDRIK · 2007 to 2021
$9.6M
Multidisciplinary Training in Image-Guided TherapyR25CA089017 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI FENNESSY, FIONA · 2001 to 2017
$7.8M
Taking advanced diffusion imaging to the clinic for pediatric patients with ADHDR01MH097979 · NIMH · BRIGHAM AND WOMEN'S HOSPITAL · PI RATHI, YOGESH · 2012 to 2017
$2.4M
Open source diffusion MRI technology for brain cancer researchU01CA199459 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI O'DONNELL, LAUREN JEAN · 2015 to 2017
$1.1M
Characterization of White Matter in Huntington's Disease Using Diffusion MRIU01NS083223 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI WESTIN, CARL-FREDRIK · 2014 to 2015
$869k
Resting-state fMRI for Language Mapping in Brain Tumor PatientsR21CA198740 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI GOLBY, ALEXANDRA J, TIE, YANMEI · 2015 to 2016
$425k
Novel diffusion MRI analysis for detection of mild traumatic brain injuryR03NS088301 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI O'DONNELL, LAUREN JEAN · 2015 to 2016
$177k
NCI NIH HHS R21 CA198740NCI NIH HHS R25 CA089017NCI NIH HHS U01 CA199459NIBIB NIH HHS P41 EB015898NIBIB NIH HHS P41 EB015902NIMH NIH HHS R01 MH074794NIMH NIH HHS R01 MH097979NIMH NIH HHS U54 MH091657NINDS NIH HHS R03 NS088301NINDS NIH HHS U01 NS083223
6 · The paper itself

Abstract

We propose a method for the automated identification of key white matter fiber tracts for neurosurgical planning, and we apply the method in a retrospective study of 18 consecutive neurosurgical patients with brain tumors. Our method is designed to be relatively robust to challenges in neurosurgical tractography, which include peritumoral edema, displacement, and mass effect caused by mass lesions. The proposed method has two parts. First, we learn a data-driven white matter parcellation or fiber cluster atlas using groupwise registration and spectral clustering of multi-fiber tractography from healthy controls. Key fiber tract clusters are identified in the atlas. Next, patient-specific fiber tracts are automatically identified using tractography-based registration to the atlas and spectral embedding of patient tractography. Results indicate good generalization of the data-driven atlas to patients: 80% of the 800 fiber clusters were identified in all 18 patients, and 94% of the 800 fiber clusters were found in 16 or more of the 18 patients. Automated subject-specific tract identification was evaluated by quantitative comparison to subject-specific motor and language functional MRI, focusing on the arcuate fasciculus (language) and corticospinal tracts (motor), which were identified in all patients. Results indicate good colocalization: 89 of 95, or 94%, of patient-specific language and motor activations were intersected by the corresponding identified tract. All patient-specific activations were within 3mm of the corresponding language or motor tract. Overall, our results indicate the potential of an automated method for identifying fiber tracts of interest for neurosurgical planning, even in patients with mass lesions.

Indexed as

AdultAgedAtlases as TopicBrain NeoplasmsDatasets as TopicDiffusion Tensor ImagingFemaleHumansImage Processing, Computer-AssistedMaleMiddle AgedNeural PathwaysRetrospective StudiesWhite MatterYoung AdultDiffusion MRIFiber tractNeurosurgeryTractographyTumorWhite matter

Identifiers

PMID27981029
PMCPMC5144756
OpenAlexW2551620403

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.