Evidence map›Paper›PMID 27980099›Full record

ArticleNucleic acids research2017

The BioGRID interaction database: 2017 update.

Andrew Chatr-Aryamontri, Rose Oughtred, Lorrie Boucher, Jennifer Rust, Christie Chang, Nadine K Kolas, Lara O'Donnell, Sara Oster, Chandra Theesfeld, Adnane Sellam and 4 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 490 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
490citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

490 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Bioprofiles and mechanistic pathways associated with Cheyne-Stokes respiration: insights from the SERVE-HF trial.Clinical research in cardiology : official journal of the German Cardiac Society · 2020
    Trial
  3. Article
  4. Article
  5. Article
  6. The aging genome exhibits organized vulnerability to somatic mutations.bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Familial Oculoauriculovertebral Spectrum: A Genomic Investigation of Autosomal Dominant Inheritance.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2026
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Omic AI reveals new autophagy regulators from the Atg1 interactome inFrontiers in cell and developmental biology · 2025
    Article
  18. Article
  19. Article
  20. Article

430 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Andrew Chatr-AryamontriInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Quebec H3T 1J4, Canada.
Rose OughtredLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
Lorrie BoucherThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada.
Jennifer RustLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
Christie ChangLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
Nadine K KolasThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada.
Lara O'DonnellThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada.
Sara OsterThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada.
Chandra TheesfeldLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
Adnane SellamCentre Hospitalier de l'Université Laval (CHUL), Québec, Québec G1V 4G2, Canada.
Chris StarkThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada.
Bobby-Joe BreitkreutzThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario M5G 1X5, Canada.
Kara DolinskiLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
Mike TyersInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Quebec H3T 1J4, Canada md.tyers@umontreal.ca.

Funding

Pilot Study: POPULATION PHARMACOLOGYU54HL117798 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI GROSSER, TILO · 2012 to 2016
$18.5M
BioGRID: An open resource for biological interactions and network analysisR01OD010929 · OD · SINAI HEALTH SYSTEM · PI KARA DOLINSKI, Mike Tyers · 2012 to 2026
$13.9M
Systematic data curation and integration to link models of human diseaseR24OD011194 · OD · PRINCETON UNIVERSITY · PI DOLINSKI, KARA · 2012 to 2014
$1.9M
Biotechnology and Biological Sciences Research Council BB/F010486/1NHLBI NIH HHS U54 HL117798NIH HHS R01 OD010929NIH HHS R24 OD011194
6 · The paper itself

Abstract

The Biological General Repository for Interaction Datasets (BioGRID: https://thebiogrid.org) is an open access database dedicated to the annotation and archival of protein, genetic and chemical interactions for all major model organism species and humans. As of September 2016 (build 3.4.140), the BioGRID contains 1 072 173 genetic and protein interactions, and 38 559 post-translational modifications, as manually annotated from 48 114 publications. This dataset represents interaction records for 66 model organisms and represents a 30% increase compared to the previous 2015 BioGRID update. BioGRID curates the biomedical literature for major model organism species, including humans, with a recent emphasis on central biological processes and specific human diseases. To facilitate network-based approaches to drug discovery, BioGRID now incorporates 27 501 chemical-protein interactions for human drug targets, as drawn from the DrugBank database. A new dynamic interaction network viewer allows the easy navigation and filtering of all genetic and protein interaction data, as well as for bioactive compounds and their established targets. BioGRID data are directly downloadable without restriction in a variety of standardized formats and are freely distributed through partner model organism databases and meta-databases.

Indexed as

Computational BiologyDatabases, GeneticProteinsAnimalsData CurationData MiningHumansProtein Interaction MappingProtein Interaction MapsProtein Processing, Post-TranslationalSoftwareProteins

Identifiers

PMID27980099
PMCPMC5210573

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.