Evidence map›Paper›PMID 27978826›Full record

ArticleBMC veterinary research2016

A novel real-time PCR assay for quantitative detection of Campylobacter fetus based on ribosomal sequences.

Gregorio Iraola, Ruben Pérez, Laura Betancor, Ana Marandino, Claudia Morsella, Alejandra Méndez, Fernando Paolicchi, Alessandra Piccirillo, Gonzalo Tomás, Alejandra Velilla and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Quadruplex qPCR for detection and discrimination of C. Coli,C. fetus, and C. Jejuni from other Campylobacter species in chicken and sheep meat.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  3. Article
  4. Bovine campylobacteriosis in bulls: insights in the conventional and molecular diagnosis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
  5. Article
  6. Comparative genomic analysis ofFrontiers in microbiology · 2023
    Article
  7. Article
  8. Article
  9. Accurate and fast identification ofVeterinary and animal science · 2021
    Article
  10. Phylogenomic Analysis ofFrontiers in microbiology · 2020
    Article
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Gregorio IraolaSección Genética Evolutiva, Facultad de Ciencias, Iguá 4225, Montevideo, 11400, Uruguay.
Ruben PérezSección Genética Evolutiva, Facultad de Ciencias, Iguá 4225, Montevideo, 11400, Uruguay.
Laura BetancorDepartamento de Bacteriología y Virología, Instituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Ana MarandinoSección Genética Evolutiva, Facultad de Ciencias, Iguá 4225, Montevideo, 11400, Uruguay.
Claudia MorsellaLaboratorio de Bacteriología, Unidad Integrada INTA-Universidad Nacional de Mar del Plata, Balcarce, Argentina.
Alejandra MéndezLaboratorio de Bacteriología, Unidad Integrada INTA-Universidad Nacional de Mar del Plata, Balcarce, Argentina.
Fernando PaolicchiLaboratorio de Bacteriología, Unidad Integrada INTA-Universidad Nacional de Mar del Plata, Balcarce, Argentina.
Alessandra PiccirilloDipartimento di Biomedicina Comparata e Alimentazione, Università degli Studi di Padova, Padova, Italy.
Gonzalo TomásSección Genética Evolutiva, Facultad de Ciencias, Iguá 4225, Montevideo, 11400, Uruguay.
Alejandra VelillaLaboratorio de Bacteriología, Unidad Integrada INTA-Universidad Nacional de Mar del Plata, Balcarce, Argentina.
Lucía CallerosSección Genética Evolutiva, Facultad de Ciencias, Iguá 4225, Montevideo, 11400, Uruguay. calleros@fcien.edu.uy.
Centro Uruguayo de Imagenología Molecular · UYNational University of Mar del Plata · ARUniversidad de la República · UYUniversity of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCampylobacter fetus is a pathogen of major concern for animal and human health. The species shows a great intraspecific variation, with three subspecies: C. fetus subsp. fetus, C. fetus subsp. venerealis, and C. fetus subsp. testudinum. Campylobacter fetus fetus affects a broad range of hosts and induces abortion in sheep and cows. Campylobacter fetus venerealis is restricted to cattle and causes the endemic disease bovine genital campylobacteriosis, which triggers reproductive problems and is responsible for major economic losses. Campylobacter fetus testudinum has been proposed recently based on genetically divergent strains isolated from reptiles and humans. Both C. fetus fetus and C. fetus testudinum are opportunistic pathogens for immune-compromised humans. Biochemical tests remain as the gold standard for identifying C. fetus but the fastidious growing requirements and the lack of reliability and reproducibility of some biochemical tests motivated the development of molecular diagnostic tools. These methods have been successfully tested on bovine isolates but fail to detect some genetically divergent strains isolated from other hosts. The aim of the present study was to develop a highly specific molecular assay to identify and quantify C. fetus strains.

resultsWe developed a highly sensitive real-time PCR assay that targets a unique region of the 16S rRNA gene. This assay successfully detected all C. fetus strains, including those that were negative for the cstA gene-based assay used as a standard for molecular C. fetus identification. The assay showed high specificity and absence of cross-reactivity with other bacterial species. The analytical testing of the assay was determined using a standard curve. The assay demonstrated a wide dynamic range between 10

conclusionsThe possibility to characterize samples in a rapid, sensitive and reproducible way makes this assay a good option to establish a new standard in molecular identification and quantification of C. fetus species.

Indexed as

Real-Time Polymerase Chain ReactionBacterial Typing TechniquesCampylobacter fetusGenetic VariationMolecular TypingReproducibility of ResultsRNA, Ribosomal, 16SSensitivity and SpecificitySpecies SpecificityRNA, Ribosomal, 16SCampylobacter fetusMolecular detectionReal-time PCR

Identifiers

PMID27978826
PMCPMC5159996
OpenAlexW2566509893

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.