Evidence map›Paper›PMID 27977887›Full record

ArticleProtein science : a publication of the Protein Society2017

Modulation of hemoglobin dynamics by an allosteric effector.

Jyotsana Lal, Marco Maccarini, Peter Fouquet, Nancy T Ho, Chien Ho, Lee Makowski

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jyotsana LalBiosciences Division, Argonne National Laboratory, Argonne, Illinois, 60439.
Marco MaccariniInstitut Laue-Langevin, CS 20156, 38042 Grenoble Cedex 9, France.
Peter FouquetInstitut Laue-Langevin, CS 20156, 38042 Grenoble Cedex 9, France.
Nancy T HoDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania, 15213.
Chien HoDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania, 15213.
Lee MakowskiBiosciences Division, Argonne National Laboratory, Argonne, Illinois, 60439.
Argonne National Laboratory · USCarnegie Mellon University · USInstitut Laue-Langevin · FR

Funding

BIOPHYSICAL & MOLECULAR BIOLOGICAL STUDIES OF HEMOGLOBINR01GM084614 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI HO, CHIEN · 2007 to 2013
$2.1M
NIGMS NIH HHS R01 GM084614
6 · The paper itself

Abstract

Hemoglobin (Hb) is an extensively studied paradigm of proteins that alter their function in response to allosteric effectors. Models of its action have been used as prototypes for structure-function relationships in many proteins, and models for the molecular basis of its function have been deeply studied and extensively argued. Recent reports suggest that dynamics may play an important role in its function. Relatively little is known about the slow, correlated motions of hemoglobin subunits in various structural states because experimental and computational strategies for their characterization are challenging. Allosteric effectors such as inositol hexaphosphate (IHP) bind to both deoxy-Hb and HbCO, albeit at different sites, leading to a lowered oxygen affinity. The manner in which these effectors impact oxygen binding is unclear and may involve changes in structure, dynamics or both. Here we use neutron spin echo measurements accompanied by wide-angle X-ray scattering to show that binding of IHP to HbCO results in an increase in the rate of coordinated motions of Hb subunits relative to one another with little if any change in large scale structure. This increase of large-scale dynamics seems to be coupled with a decrease in the average magnitude of higher frequency modes of individual residues. These observations indicate that enhanced dynamic motions contribute to the functional changes induced by IHP and suggest that they may be responsible for the lowered oxygen affinity triggered by these effectors.

Indexed as

Allosteric RegulationCarboxyhemoglobinHumansPhytic AcidProtein BindingX-Ray DiffractionCarboxyhemoglobinPhytic Acidhemoglobinneutron spin echoprotein dynamicsX-ray solution scattering

Identifiers

PMID27977887
PMCPMC5326564
OpenAlexW2561771613

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.