Evidence map›Paper›PMID 27976703›Full record

ArticleScientific reports2016

The genome of Rhizobiales bacteria in predatory ants reveals urease gene functions but no genes for nitrogen fixation.

Minna-Maria Neuvonen, Daniel Tamarit, Kristina Näslund, Juergen Liebig, Heike Feldhaar, Nancy A Moran, Lionel Guy, Siv G E Andersson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 72 citations in OpenAlex.

  1. Description ofInternational journal of systematic and evolutionary microbiology · 2026
    Article
  2. The littler things that run the little things that run the world.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Symbiotic solutions for colony nutrition: Conserved nitrogen recycling within the bacterial pouch ofProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  6. A novelmSystems · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Minna-Maria NeuvonenDepartment of Molecular Evolution, Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, SE-752 36 Uppsala, Sweden.
Daniel TamaritDepartment of Molecular Evolution, Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, SE-752 36 Uppsala, Sweden.
Kristina NäslundDepartment of Molecular Evolution, Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, SE-752 36 Uppsala, Sweden.
Juergen LiebigSchool of Life Sciences, Arizona State University, Tempe, AZ, 85287, USA.
Heike FeldhaarAnimal Population Ecology, Department of Animal Ecology I, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, D-95440, Bayreuth, Germany.
Nancy A MoranDepartment of Integrative Biology, University of Texas, Austin, Texas, USA.
Lionel GuyDepartment of Molecular Evolution, Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, SE-752 36 Uppsala, Sweden.
Siv G E AnderssonDepartment of Molecular Evolution, Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, SE-752 36 Uppsala, Sweden.
Science for Life Laboratory · SEUppsala University · SEArizona State University · USThe University of Texas at Austin · USUniversity of Bayreuth · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gut-associated microbiota of ants include Rhizobiales bacteria with affiliation to the genus Bartonella. These bacteria may enable the ants to fix atmospheric nitrogen, but no genomes have been sequenced yet to test the hypothesis. Sequence reads from a member of the Rhizobiales were identified in the data collected in a genome project of the ant Harpegnathos saltator. We present an analysis of the closed 1.86 Mb genome of the ant-associated bacterium, for which we suggest the species name Candidatus Tokpelaia hoelldoblerii. A phylogenetic analysis reveals a relationship to Bartonella and Brucella, which infect mammals. Novel gene acquisitions include a gene for a putative extracellular protein of more than 6,000 amino acids secreted by the type I secretion system, which may be involved in attachment to the gut epithelium. No genes for nitrogen fixation could be identified, but genes for a multi-subunit urease protein complex are present in the genome. The urease genes are also present in Brucella, which has a fecal-oral transmission pathway, but not in Bartonella, which use blood-borne transmission pathways. We hypothesize that the gain and loss of the urease function is related to transmission strategies and lifestyle changes in the host-associated members of the Rhizobiales.

Indexed as

Genome, BacterialAlphaproteobacteriaAnimalsAntsBacterial ProteinsCluster AnalysisGastrointestinal MicrobiomeGlutamate-Ammonia LigaseNitrogen FixationPhylogenyRNA, Ribosomal, 16SSymbiosisType I Secretion SystemsUreaseBacterial ProteinsGlutamate-Ammonia LigaseRNA, Ribosomal, 16SType I Secretion SystemsUrease

Identifiers

PMID27976703
PMCPMC5156944
OpenAlexW2562512327

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.