Evidence map›Paper›PMID 27974460›Full record

ArticleThe Journal of biological chemistry2017

Metnase Mediates Loading of Exonuclease 1 onto Single Strand Overhang DNA for End Resection at Stalled Replication Forks.

Hyun-Suk Kim, Elizabeth A Williamson, Jac A Nickoloff, Robert A Hromas, Suk-Hee Lee

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

  1. Cellular Responses to Widespread DNA Replication Stress.International journal of molecular sciences · 2023
    Review
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  11. MiR223-3p promotes synthetic lethality in BRCA1-deficient cancers.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Hyun-Suk KimFrom the Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana 46202.
Elizabeth A Williamsonthe Department of Medicine, University of Florida and Shands Health Care System, Gainesville, Florida 32610, and.
Jac A Nickoloffthe Department of Environmental and Radiological Health Sciences, Colorado State University, Fort Collins, Colorado 80523.
Robert A Hromasthe Department of Medicine, University of Florida and Shands Health Care System, Gainesville, Florida 32610, and.
Suk-Hee LeeFrom the Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana 46202, slee@iu.edu.
Indiana University School of MedicineUniversity of Florida Health · USColorado State University · US

Funding

EEPD1 Repair of Stressed Replication ForksR01CA205224 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Robert A Hromas · 2016 to 2026
$3.3M
METNASE ROLES IN NHEJ, DNA INTEGRATION AND TRANSLOCATIONR01GM084020 · NIGMS · COLORADO STATE UNIVERSITY · PI NICKOLOFF, JAC A · 2009 to 2016
$2.4M
Non-Homologous End Joining Repair in HumansR01CA151367 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI LEE, SUK-HEE · 2011 to 2015
$1.6M
EPIGENETIC CONTROL OF NHEJ DNA REPAIRR01CA139429 · NCI · UNIVERSITY OF NEW MEXICO · PI HROMAS, ROBERT A · 2010 to 2014
$1.5M
Mechanisms for Chromosomal TranslocationsR01GM109645 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HROMAS, ROBERT A · 2015 to 2018
$1.2M
NCI NIH HHS R01 CA139429NCI NIH HHS R01 CA151367NCI NIH HHS R01 CA205224NIGMS NIH HHS R01 GM084020NIGMS NIH HHS R01 GM109645
6 · The paper itself

Abstract

Stalling at DNA replication forks generates stretches of single-stranded (ss) DNA on both strands that are exposed to nucleolytic degradation, potentially compromising genome stability. One enzyme crucial for DNA replication fork repair and restart of stalled forks in human is Metnase (also known as SETMAR), a chimeric fusion protein consisting of a su(var)3-9, enhancer-of-zeste and trithorax (SET) histone methylase and transposase nuclease domain. We previously showed that Metnase possesses a unique fork cleavage activity necessary for its function in replication restart and that its SET domain is essential for recovery from hydroxyurea-induced DNA damage. However, its exact role in replication restart is unclear. In this study, we show that Metnase associates with exonuclease 1 (Exo1), a 5'-exonuclease crucial for 5'-end resection to mediate DNA processing at stalled forks. Metnase DNA cleavage activity was not required for Exo1 5'-exonuclease activity on the lagging strand daughter DNA, but its DNA binding activity mediated loading of Exo1 onto ssDNA overhangs. Metnase-induced enhancement of Exo1-mediated DNA strand resection required the presence of these overhangs but did not require Metnase's DNA cleavage activity. These results suggest that Metnase enhances Exo1-mediated exonuclease activity on the lagging strand DNA by facilitating Exo1 loading onto a single strand gap at the stalled replication fork.

Indexed as

DNA DamageDNA ReplicationDNA Repair EnzymesDNA, Single-StrandedExodeoxyribonucleasesHEK293 CellsHistone-Lysine N-MethyltransferaseHumansHydroxyureaDNA Repair EnzymesDNA, Single-StrandedEXO1 protein, humanExodeoxyribonucleasesHistone-Lysine N-MethyltransferaseHydroxyureaSETMAR protein, humanDNA-binding proteinDNA damageDNA enzymeDNA repairDNA replication

Identifiers

PMID27974460
PMCPMC5270484
OpenAlexW2562079131

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.