Evidence map›Paper›PMID 27966602›Full record

ArticleScientific reports2016

Validated methodology for quantifying infestation levels of dreissenid mussels in environmental DNA (eDNA) samples.

Luis Peñarrubia, Carles Alcaraz, Abraham Bij de Vaate, Nuria Sanz, Carles Pla, Oriol Vidal, Jordi Viñas

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Luis PeñarrubiaLaboratori d'Ictiologia Genètica, Department of Biology, Universitat de Girona, LEAR Building, Girona, 17003, Spain.
Carles AlcarazIRTA Aquatic Ecosystems, Sant Carles de la Ràpita, 43540, Spain.
Abraham Bij de VaateWaterfauna Hydrobiologisch Adviesbureau, Oostrandpark 30, 8212 AP Lelystad, The Netherlands.
Nuria SanzLaboratori d'Ictiologia Genètica, Department of Biology, Universitat de Girona, LEAR Building, Girona, 17003, Spain.
Carles PlaLaboratori d'Ictiologia Genètica, Department of Biology, Universitat de Girona, LEAR Building, Girona, 17003, Spain.
Oriol VidalLaboratori d'Ictiologia Genètica, Department of Biology, Universitat de Girona, LEAR Building, Girona, 17003, Spain.
Jordi ViñasLaboratori d'Ictiologia Genètica, Department of Biology, Universitat de Girona, LEAR Building, Girona, 17003, Spain.
University of Girona · ESInstitute for Research and Technology in Food and Agriculture · ESInternational Commission for the Hydrology of the Rhine Basin · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The zebra mussel (Dreissena polymorpha Pallas, 1771) and the quagga mussel (D. rostriformis Deshayes, 1838) are successful invasive bivalves with substantial ecological and economic impacts in freshwater systems once they become established. Since their eradication is extremely difficult, their detection at an early stage is crucial to prevent spread. In this study, we optimized and validated a qPCR detection method based on the histone H2B gene to quantify combined infestation levels of zebra and quagga mussels in environmental DNA samples. Our results show specific dreissenid DNA present in filtered water samples for which microscopic diagnostic identification for larvae failed. Monitoring a large number of locations for invasive dreissenid species based on a highly specific environmental DNA qPCR assay may prove to be an essential tool for management and control plans focused on prevention of establishment of dreissenid mussels in new locations.

Indexed as

AnimalsDNADreissenaEnvironmental MonitoringFresh WaterHistonesIntroduced SpeciesLarvaWater PurificationDNAHistones

Identifiers

PMID27966602
PMCPMC5155230
OpenAlexW2561618184

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.