Evidence map›Paper›PMID 27965699›Full record

ArticleFrontiers in plant science2016

Genome-Wide Association Study for Plant Height and Grain Yield in Rice under Contrasting Moisture Regimes.

Xiaosong Ma, Fangjun Feng, Haibin Wei, Hanwei Mei, Kai Xu, Shoujun Chen, Tianfei Li, Xiaohua Liang, Hongyan Liu, Lijun Luo

Abstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

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  12. Genome-Wide Association Study Identifies a Plant-Height-Associated GeneInternational journal of molecular sciences · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Biotechnological Advances to Improve Abiotic Stress Tolerance in Crops.International journal of molecular sciences · 2022
    Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xiaosong MaCollege of Plant Sciences & Technology, Huazhong Agricultural UniversityWuhan, China; Shanghai Agrobiological Gene CenterShanghai, China.
Fangjun FengShanghai Agrobiological Gene Center Shanghai, China.
Haibin WeiShanghai Agrobiological Gene Center Shanghai, China.
Hanwei MeiShanghai Agrobiological Gene Center Shanghai, China.
Kai XuShanghai Agrobiological Gene Center Shanghai, China.
Shoujun ChenShanghai Agrobiological Gene Center Shanghai, China.
Tianfei LiShanghai Agrobiological Gene Center Shanghai, China.
Xiaohua LiangShanghai Agrobiological Gene Center Shanghai, China.
Hongyan LiuShanghai Agrobiological Gene Center Shanghai, China.
Lijun LuoCollege of Plant Sciences & Technology, Huazhong Agricultural UniversityWuhan, China; Shanghai Agrobiological Gene CenterShanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drought is one of the vitally critical environmental stresses affecting both growth and yield potential in rice. Drought resistance is a complicated quantitative trait that is regulated by numerous small effect loci and hundreds of genes controlling various morphological and physiological responses to drought. For this study, 270 rice landraces and cultivars were analyzed for their drought resistance. This was done via determination of changes in plant height and grain yield under contrasting water regimes, followed by detailed identification of the underlying genetic architecture via genome-wide association study (GWAS). We controlled population structure by setting top two eigenvectors and combining kinship matrix for GWAS in this study. Eighteen, five, and six associated loci were identified for plant height, grain yield per plant, and drought resistant coefficient, respectively. Nine known functional genes were identified, including five for plant height (

Indexed as

candidate genesdrought resistancegrain yieldGWASplant height

Identifiers

PMID27965699
PMCPMC5126757

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.