Evidence map›Paper›PMID 27965447›Full record

ArticlemBio2016

The Antiviral Mechanism of an Influenza A Virus Nucleoprotein-Specific Single-Domain Antibody Fragment.

Leo Hanke, Kevin E Knockenhauer, R Camille Brewer, Eline van Diest, Florian I Schmidt, Thomas U Schwartz, Hidde L Ploegh

Open access · goldAbstract read
In one paragraph

Article in mBio, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

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  16. Exploring cellular biochemistry with nanobodies.The Journal of biological chemistry · 2020
    Review
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  18. An update on antiviral antibody-based biopharmaceuticals.International immunopharmacology · 2020
    Review
  19. Protein Vaccination Directs the CD4Journal of virology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Leo HankeWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Kevin E KnockenhauerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
R Camille BrewerWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Eline van DiestWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Florian I SchmidtWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Thomas U SchwartzDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Hidde L PloeghWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA ploegh@wi.mit.edu.
Whitehead Institute for Biomedical Research · USMassachusetts Institute of Technology · US

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
A new strategy to disrupt protein-protein interactions in eukaryotic cells.DP1GM106409 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI PLOEGH, HIDDE L. · 2012 to 2016
$4.8M
Sortase-mediated protein engineering for the study of host-pathogen interactionsR01AI087879 · NIAID · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI PLOEGH, HIDDE L. · 2010 to 2019
$4.5M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
NCRR NIH HHS S10 RR029205NIAID NIH HHS R01 AI087879NIGMS NIH HHS DP1 GM106409NIGMS NIH HHS P41 GM103403
6 · The paper itself

Abstract

Alpaca-derived single-domain antibody fragments (VHHs) that target the influenza A virus nucleoprotein (NP) can protect cells from infection when expressed in the cytosol. We found that one such VHH, αNP-VHH1, exhibits antiviral activity similar to that of Mx proteins by blocking nuclear import of incoming viral ribonucleoproteins (vRNPs) and viral transcription and replication in the nucleus. We determined a 3.2-Å crystal structure of αNP-VHH1 in complex with influenza A virus NP. The VHH binds to a nonconserved region on the body domain of NP, which has been associated with binding to host factors and serves as a determinant of host range. Several of the NP/VHH interface residues determine sensitivity of NP to antiviral Mx GTPases. The structure of the NP/αNP-VHH1 complex affords a plausible explanation for the inhibitory properties of the VHH and suggests a rationale for the antiviral properties of Mx proteins. Such knowledge can be leveraged for much-needed novel antiviral strategies. IMPORTANCE: Influenza virus strains can rapidly escape from protection afforded by seasonal vaccines or acquire resistance to available drugs. Additional ways to interfere with the virus life cycle are therefore urgently needed. The influenza virus nucleoprotein is one promising target for antiviral interventions. We have previously isolated alpaca-derived single-domain antibody fragments (VHHs) that protect cells from influenza virus infection if expressed intracellularly. We show here that one such VHH exhibits antiviral activities similar to those of proteins of the cellular antiviral defense (Mx proteins). We determined the three-dimensional structure of this VHH in complex with the influenza virus nucleoprotein and identified the interaction site, which overlaps regions that determine sensitivity of the virus to Mx proteins. Our data define a new vulnerability of influenza virus, help us to better understand the cellular antiviral mechanisms, and provide a well-characterized tool to further study them.

Indexed as

Active Transport, Cell NucleusAnimalsAntiviral AgentsCamelids, New WorldCell NucleusCrystallography, X-RayHumansInfluenza A virusMolecular ConformationMyxovirus Resistance ProteinsNucleocapsid ProteinsRNA-Binding ProteinsSingle-Domain AntibodiesViral Core ProteinsAntiviral AgentsMyxovirus Resistance ProteinsNP protein, Influenza A virusNucleocapsid ProteinsRNA-Binding ProteinsSingle-Domain AntibodiesViral Core Proteins

Identifiers

PMID27965447
PMCPMC5156300
OpenAlexW2562771391

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.