Evidence map›Paper›PMID 27965039›Full record

ArticleBehavioural brain research2017

Genetic predisposition to high anxiety- and depression-like behavior coincides with diminished DNA methylation in the adult rat amygdala.

Chelsea R McCoy, Nateka L Jackson, Jeremy Day, Sarah M Clinton

Abstract read
In one paragraph

Article in Behavioural brain research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Epigenetics, Nutrition, and the Brain: Improving Mental Health through Diet.International journal of molecular sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Resilience to Stress: Lessons from Rodents about Nature versus Nurture.The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry · 2022
    Review
  11. Review
  12. Article
  13. Article
  14. Anxiety Behavior in Pigs (Frontiers in veterinary science · 2021
    Article
  15. Review
  16. Gender-Dependent Effect of Maternal Methyl-Enriched Diet on the Expression of Genetic Absence Epilepsy and Comorbid Depression in Adult Offspring of WAG/Rij Rats.Doklady biological sciences : proceedings of the Academy of Sciences of the USSR, Biological sciences sections · 2020
    Article
  17. International journal of molecular sciences · 2020
    Review
  18. Oxidative metabolism alterations in the emotional brain of anxiety-prone rats.Progress in neuro-psychopharmacology & biological psychiatry · 2019
    Article
  19. DNA Methylation within the Amygdala Early in Life Increases Susceptibility for Depression and Anxiety Disorders.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chelsea R McCoySchool of Neuroscience, Virginia Tech University, Blacksburg, VA 24060, USA.
Nateka L JacksonDepartment of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham AL, USA.
Jeremy DayDepartment of Neurobiology, University of Alabama at Birmingham AL, USA.
Sarah M ClintonSchool of Neuroscience, Virginia Tech University, Blacksburg, VA 24060, USA. Electronic address: sclinton@vt.edu.
University of Alabama at Birmingham · USVirginia Tech · US

Funding

Dental Academic Research Training Program (DART)T90DE022736 · NIDCR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Amjad Javed · 2012 to 2026
$6.7M
Epigenetics, Neurodevelopment, and Emotional BehaviorR01MH105447 · NIMH · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI CLINTON, SARAH M · 2015 to 2019
$1.9M
NIDCR NIH HHS T90 DE022736NIMH NIH HHS R01 MH105447
6 · The paper itself

Abstract

Understanding biological mechanisms that shape vulnerability to emotional dysfunction is critical for elucidating the neurobiology of psychiatric illnesses like anxiety and depression. To elucidate molecular and epigenetic alterations in the brain that contribute to individual differences in emotionality, our laboratory utilized a rodent model of temperamental differences. Rats bred for low response to novelty (Low Responders, LRs) are inhibited in novel situations and display high anxiety, helplessness, and diminished sociability compared to High Novelty Responder (HR) rats. Our current transcriptome profiling experiment identified widespread gene expression differences in the amygdala of adult HR/LR rats; we hypothesize that HR/LR gene expression and downstream behavioral differences stem from distinct epigenetic (specifically DNA methylation) patterning in the HR/LR brain. Although we found similar levels of DNA methyltransferase proteins in the adult HR/LR amygdala, next-generation sequencing analysis of the methylome revealed 793 differentially methylated genomic sites between the groups. Most of the differentially methylated sites were hypermethylated in HR versus LR, so we next tested the hypothesis that enhancing DNA methylation in LRs would improve their anxiety/depression-like phenotype. We found that increasing DNA methylation in LRs (via increased dietary methyl donor content) improved their anxiety-like behavior and decreased their typically high levels of Forced Swim Test (FST) immobility; however, dietary methyl donor depletion exacerbated LRs' high FST immobility. These data are generally consistent with findings in depressed patients showing that treatment with DNA methylation-promoting agents improves depressive symptoms, and highlight epigenetic mechanisms that may contribute to individual differences in risk for emotional dysfunction.

Indexed as

Genetic Predisposition to Disease5-MethylcytosineAmygdalaAnimalsAnxietyDepressionDietDisease Models, AnimalDNA MethylationExploratory BehaviorFood DeprivationGene Expression ProfilingMaleMaze LearningMethyltransferasesMicroarray Analysis5-MethylcytosineMethyltransferasesAnxietyDepressionDietDNA methylationEpigeneticsMethyl depletion

Identifiers

PMID27965039
PMCPMC5239722
OpenAlexW2559891750

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.