Evidence map›Paper›PMID 27956638›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Palmitoylation regulates glutamate receptor distributions in postsynaptic densities through control of PSD95 conformation and orientation.

Okunola Jeyifous, Eric I Lin, Xiaobing Chen, Sarah E Antinone, Ryan Mastro, Renaldo Drisdel, Thomas S Reese, William N Green

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
  2. Reversible, Chemically Gated FRET via Ligand-Activated Acceptors.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Profiling the landscape of cysteine posttranslational modifications in brain aging and neurodegeneration.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2025
    Review
  7. Review
  8. Article
  9. Article
  10. Altered Protein Palmitoylation as Disease Mechanism in Neurodegenerative Disorders.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Review
  11. Review
  12. Article
  13. Mechanisms and functions of protein S-acylation.Nature reviews. Molecular cell biology · 2024
    Review
  14. Review
  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Okunola JeyifousDepartment of Neurobiology, University of Chicago, Chicago, IL 60637.
Eric I LinDepartment of Neurobiology, University of Chicago, Chicago, IL 60637.
Xiaobing ChenMarine Biological Laboratory, Woods Hole, MA 02543.
Sarah E AntinoneDepartment of Neurobiology, University of Chicago, Chicago, IL 60637.
Ryan MastroDepartment of Neurobiology, University of Chicago, Chicago, IL 60637.
Renaldo DrisdelDepartment of Neurobiology, University of Chicago, Chicago, IL 60637.
Thomas S ReeseMarine Biological Laboratory, Woods Hole, MA 02543; treese@mbl.edu wgreen@uchicago.edu.
William N GreenDepartment of Neurobiology, University of Chicago, Chicago, IL 60637; treese@mbl.edu wgreen@uchicago.edu.
University of Chicago · USMarine Biological Laboratory · USNational Institutes of Health · US

Funding

Macromolecular Architecture Of The SynapseZIANS002972 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI REESE, THOMAS S · 2009 to 2025
$25.6M
TRANSLATIONAL RESEARCH UNIVERSITY OF CHICAGO: CLINICAL TRIALSUL1RR024999 · NCRR · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2007 to 2011
$25.3M
THE UPREGULATION OF NICOTINIC RECEPTORSP01DA019695 · NIDA · UNIVERSITY OF CHICAGO · PI GREEN, WILLIAM · 2007 to 2011
$4.5M
The Neuronal alpha-bungarotoxin Binding SiteR01NS043782 · NINDS · UNIVERSITY OF CHICAGO · PI GREEN, WILLIAM · 2003 to 2012
$3.0M
Different components of nicotine-induced upregulation of nicotinic receptors - E. Hunpatin SupplementR01DA035430 · NIDA · UNIVERSITY OF CHICAGO · PI GREEN, WILLIAM · 2013 to 2017
$2.3M
Proteomic Assays of Neuronal Protein PalmitoylationR21MH081251 · NIMH · UNIVERSITY OF CHICAGO · PI GREEN, WILLIAM · 2010 to 2011
$456k
The Neuronal alpha-bungarotoxin Binding SiteR56NS043782 · NINDS · UNIVERSITY OF CHICAGO · PI GREEN, WILLIAM · 2008 to 2008
$308k
NCRR NIH HHS UL1 RR024999NIDA NIH HHS P01 DA019695NIDA NIH HHS R01 DA035430NIMH NIH HHS R21 MH081251NINDS NIH HHS R01 NS043782NINDS NIH HHS R56 NS043782
6 · The paper itself

Abstract

Postsynaptic density protein 95 (PSD95) and synapse-associated protein 97 (SAP97) are homologous scaffold proteins with different N-terminal domains, possessing either a palmitoylation site (PSD95) or an L27 domain (SAP97). Here, we measured PSD95 and SAP97 conformation in vitro and in postsynaptic densities (PSDs) using FRET and EM, and examined how conformation regulated interactions with AMPA-type and NMDA-type glutamate receptors (AMPARs/NMDARs). Palmitoylation of PSD95 changed its conformation from a compact to an extended configuration. PSD95 associated with AMPARs (via transmembrane AMPAR regulatory protein subunits) or NMDARs [via glutamate ionotropic receptor NMDA-type subunit 2B (GluN2B) subunits] only in its palmitoylated and extended conformation. In contrast, in its extended conformation, SAP97 associates with NMDARs, but not with AMPARs. Within PSDs, PSD95 and SAP97 were largely in the extended conformation, but had different orientations. PSD95 oriented perpendicular to the PSD membrane, with its palmitoylated, N-terminal domain at the membrane. SAP97 oriented parallel to the PSD membrane, likely as a dimer through interactions of its N-terminal L27 domain. Changing PSD95 palmitoylation in PSDs altered PSD95 and AMPAR levels but did not affect NMDAR levels. These results indicate that in PSDs, PSD95 palmitoylation, conformation, and its interactions are dynamic when associated with AMPARs and more stable when associated with NMDARs. Altogether, our results are consistent with differential regulation of PSD95 palmitoylation in PSDs resulting from the clustering of palmitoylating and depalmitoylating enzymes into AMPAR nanodomains segregated away from NMDAR nanodomains.

Indexed as

LipoylationPost-Synaptic DensityAdaptor Proteins, Signal TransducingAnimalsDiscs Large Homolog 1 ProteinDisks Large Homolog 4 ProteinGreen Fluorescent ProteinsHEK293 CellsHippocampusHumansMembrane ProteinsMutationNeuronsProtein DomainsProtein MultimerizationRatsAdaptor Proteins, Signal Transducingalpha-amino-3-hydroxy-5-methylisoxazole-4-propionic acid subtype glutamate receptor, humanDiscs Large Homolog 1 ProteinDisks Large Homolog 4 ProteinDLG1 protein, humanDLG4 protein, humanDlg4 protein, ratGreen Fluorescent ProteinsMembrane ProteinsReceptors, GlutamateReceptors, N-Methyl-D-AspartateAMPA receptorNMDA receptorpalmitoylationPSD95SAP97

Identifiers

PMID27956638
PMCPMC5206547
OpenAlexW2567675045

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.