Evidence map›Paper›PMID 27942424›Full record

ArticleEnvironmental sciences Europe2016

Levels of DNA methylation and transcript accumulation in leaves of transgenic maize varieties.

Vinicius Vilperte, Sarah Zanon Agapito-Tenfen, Odd-Gunnar Wikmark, Rubens Onofre Nodari

Abstract read
In one paragraph

Article in Environmental sciences Europe, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Elevated COScientific reports · 2020
    Article
  3. Epigenomic landscape and epigenetic regulation in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  4. Article
  5. Article
  6. Overexpression of SbSI-1, A Nuclear Protein fromFrontiers in plant science · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vinicius VilperteDepartment of Crop Science, Federal University of Santa Catarina, Florianópolis, Santa Catarina Brazil ; GenØk - Centre for Biosafety, Tromsø, Norway ; Institute for Plant Genetics, Faculty of Natural Sciences, Leibniz University of Hannover, Hannover, Germany.ORCID 0000-0002-5741-8016
Sarah Zanon Agapito-TenfenGenØk - Centre for Biosafety, Tromsø, Norway.
Odd-Gunnar WikmarkGenØk - Centre for Biosafety, Tromsø, Norway ; Unit for Environmental Science and Management, Potchefstroom Campus, North West University, Potchefstroom, South Africa.
Rubens Onofre NodariDepartment of Crop Science, Federal University of Santa Catarina, Florianópolis, Santa Catarina Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrior to their release in the environment, transgenic crops are examined for their health and environmental safety. In addition, transgene expression needs to be consistent in order to express the introduced trait (e.g. insecticidal and/or herbicide tolerance). Moreover, data on expression levels for GM events are usually required for approval, but these are rarely disclosed or they are considered insufficient. On the other hand, biosafety regulators do not consider epigenetic regulation (e.g. DNA methylation, ncRNAs and histone modifications), which are broadly known to affect gene expression, within their risk assessment analyses. Here we report the results of a DNA methylation (bisulfite sequencing) and transgene transcript accumulation (RT-qPCR) analysis of four Bt-expressing single transgenic maize hybrids, under different genetic backgrounds, and a stacked transgenic hybrid expressing both insecticidal and herbicide tolerance traits.

resultsOur results showed differences in cytosine methylation levels in the FMV promoter and

conclusionsOverall, our results show differences in DNA methylation patterns in all varieties, as well as in transgene transcript accumulation levels. Although the detection of changes in DNA methylation and transgenic accumulation levels does not present a safety issue per se, it demonstrates the need for additional studies that focus on detecting possible safety implications of such changes.

Indexed as

DNA methylationEpigeneticsGenetically modified organismGenetic stabilityRisk assessmentStacked GMOZea mays

Identifiers

PMID27942424
PMCPMC5120055

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.