Evidence map›Paper›PMID 27941094›Full record

ArticleAnnals of botany2017

The Fusarium crown rot pathogen Fusarium pseudograminearum triggers a suite of transcriptional and metabolic changes in bread wheat (Triticum aestivum L.).

Jonathan J Powell, Jason Carere, Timothy L Fitzgerald, Jiri Stiller, Lorenzo Covarelli, Qian Xu, Frank Gubler, Michelle L Colgrave, Donald M Gardiner, John M Manners and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 2 pooled it
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 2 syntheses or guidelines pooled it, 65 citations in OpenAlex.

  1. Pooled it
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  8. Review
  9. TaHSP18.6 and TaSRT1 interact to confer resistance toProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  12. A novel QTL conferring Fusarium crown rot resistance on chromosome 2A in a wheat EMS mutant.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  13. Review
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  18. 3-keto-DON, but Not 3-International journal of molecular sciences · 2022
    Article
  19. Pathogen-induced biosynthetic pathways encode defense-related molecules in bread wheat.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. BdGUCD1 and Cyclic GMP Are Required for Responses ofInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Jonathan J PowellCommonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture, Queensland Bioscience Precinct, St Lucia, 4067 Queensland, Australia.
Jason CarereCommonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture, Queensland Bioscience Precinct, St Lucia, 4067 Queensland, Australia.
Timothy L FitzgeraldCommonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture, Queensland Bioscience Precinct, St Lucia, 4067 Queensland, Australia.
Jiri StillerCommonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture, Queensland Bioscience Precinct, St Lucia, 4067 Queensland, Australia.
Lorenzo CovarelliDepartment of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX Giugno 74, 06121 Perugia, Italy.
Qian XuCommonwealth Scientific and Industrial Research Organisation Agriculture, Black Mountain, Australian Capital Territory, 2610, Australia.
Frank GublerCommonwealth Scientific and Industrial Research Organisation Agriculture, Black Mountain, Australian Capital Territory, 2610, Australia.
Michelle L ColgraveCommonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture, Queensland Bioscience Precinct, St Lucia, 4067 Queensland, Australia.
Donald M GardinerQueensland Alliance for Agriculture and Food Innovation, University of Queensland, 4072, St Lucia, Queensland, Australia.
John M MannersCommonwealth Scientific and Industrial Research Organisation Agriculture, Black Mountain, Australian Capital Territory, 2610, Australia.
Robert J HenryQueensland Alliance for Agriculture and Food Innovation, University of Queensland, 4072, St Lucia, Queensland, Australia.
Kemal KazanCommonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture, Queensland Bioscience Precinct, St Lucia, 4067 Queensland, Australia.
Commonwealth Scientific and Industrial Research Organisation · AUACT GovernmentAgriculture and Food · AUUniversity of Queensland · AUUniversity of Perugia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Aims: Fusarium crown rot caused by the fungal pathogen Fusarium pseudograminearum is a disease of wheat and barley, bearing significant economic cost. Efforts to develop effective resistance to this disease have been hampered by the quantitative nature of resistance and a lack of understanding of the factors associated with resistance and susceptibility. Here, we aimed to dissect transcriptional responses triggered in wheat by F. pseudograminearum infection. Methods: We used an RNA-seq approach to analyse host responses during a compatible interaction and identified >2700 wheat genes differentially regulated after inoculation with F. pseudograminearum . The production of a few key metabolites and plant hormones in the host during the interaction was also analysed. Key Results: Analysis of gene ontology enrichment showed that a disproportionate number of genes involved in primary and secondary metabolism, signalling and transport were differentially expressed in infected seedlings. A number of genes encoding pathogen-responsive uridine-diphosphate glycosyltransferases (UGTs) potentially involved in detoxification of the Fusarium mycotoxin deoxynivalenol (DON) were differentially expressed. Using a F. pseudograminearum DON-non-producing mutant, DON was shown to play an important role in virulence during Fusarium crown rot. An over-representation of genes involved in the phenylalanine, tryptophan and tyrosine biosynthesis pathways was observed. This was confirmed through metabolite analyses that demonstrated tryptamine and serotonin levels are induced after F. pseudograminearum inoculation. Conclusions: Overall, the observed host response in bread wheat to F. pseudograminearum during early infection exhibited enrichment of processes related to pathogen perception, defence signalling, transport and metabolism and deployment of chemical and enzymatic defences. Additional functional analyses of candidate genes should reveal their roles in disease resistance or susceptibility. Better understanding of host responses contributing to resistance and/or susceptibility will aid the development of future disease improvement strategies against this important plant pathogen.

Indexed as

Gene Expression Regulation, PlantFusariumHigh-Throughput Nucleotide SequencingHost-Pathogen InteractionsPlant DiseasesSequence Analysis, DNATrichothecenesTriticumdeoxynivalenolTrichothecenesbiotic stressdeoxynivalenolFusariumjasmonateRNA-seqsalicylic acidsecologaninserotoninTri5Wheat

Identifiers

PMID27941094
PMCPMC5604588
OpenAlexW2560385434

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.