Evidence map›Paper›PMID 27939437›Full record

ArticleBiochimica et biophysica acta. Proteins and proteomics2017

The dual enzyme LRRK2 hydrolyzes GTP in both its GTPase and kinase domains in vitro.

Zhiyong Liu, Andrew B West

Abstract read
In one paragraph

Article in Biochimica et biophysica acta. Proteins and proteomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Multifaceted Rho GTPase Signaling at the Endomembranes.Frontiers in cell and developmental biology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Zhiyong LiuCenter for Neurodegeneration and Experimental Therapeutics, Department of Neurology, The University of Alabama at Birmingham, United States.
Andrew B WestCenter for Neurodegeneration and Experimental Therapeutics, Department of Neurology, The University of Alabama at Birmingham, United States. Electronic address: abwest@uab.edu.
University of Alabama at Birmingham · US

Funding

Mechanisms of LRRK2 Mediated NeurotoxicityR01NS064934 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WEST, ANDREW B · 2010 to 2025
$6.3M
Efficacies and Pharmacodynamic Assays for LRRK2 Small-Molecule InhibitorsR21NS097643 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WEST, ANDREW B · 2016 to 2016
$368k
NINDS NIH HHS R01 NS064934NINDS NIH HHS R21 NS097643
6 · The paper itself

Abstract

The evolutionarily conserved enzyme encoded by the leucine-rich repeat kinase 2 gene, LRRK2, harbors both a Rab-like GTPase domain and a serine/threonine protein kinase domain. Pathogenic mutations in either the GTPase or kinase domain can cause neurodegeneration and Parkinson disease. No high-resolution structure of the human LRRK2 kinase domain is available but the most common mutation, G2019S in the kinase domain, is predicted to alter the ATP-binding pocket structure and interaction with divalent cations. Here we find that the manganese-bound kinase domain acquires a robust ability to utilize both GTP as well as ATP in autophosphorylation of the GTPase domain and phosphorylation of peptide substrates in vitro. The G2019S LRRK2 mutation increases the efficiency of GTP-mediated kinase activity ten-fold compared to WT LRRK2 activity. Moreover, GTP-dependent phosphorylation alters autophosphorylation-site preference in vitro. While additional studies are required to determine the physiological relevance of these observations, LRRK2 is one of the only known kinases to be able to utilize GTP as a phospho-donor at physiological levels in vitro, and thus one of the only known proteins to be able to hydrolyze GTP in two distinct domains within the same protein.

Indexed as

Adenosine TriphosphateBinding SitesGTP PhosphohydrolasesGuanosine TriphosphateHumansHydrolysisLeucine-Rich Repeat Serine-Threonine Protein Kinase-2MutationPhosphorylationProtein BindingProtein Serine-Threonine KinasesProtein Structure, TertiaryRecombinant ProteinsAdenosine TriphosphateGTP PhosphohydrolasesGuanosine TriphosphateLeucine-Rich Repeat Serine-Threonine Protein Kinase-2Protein Serine-Threonine KinasesRecombinant ProteinsDardarinEnzyme kineticsManganeseNucleotide-binding pocketPARK8ROCO4

Identifiers

PMID27939437
PMCPMC5278637
OpenAlexW2560735197

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.